Gene Ava_3022 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_3022 
SymbolpurT 
ID3681199 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp3745640 
End bp3746815 
Gene Length1176 bp 
Protein Length391 aa 
Translation table11 
GC content42% 
IMG OID637718368 
Productphosphoribosylglycinamide formyltransferase 2 
Protein accessionYP_323527 
Protein GI75909231 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0027] Formate-dependent phosphoribosylglycinamide formyltransferase (GAR transformylase) 
TIGRFAM ID[TIGR01142] phosphoribosylglycinamide formyltransferase 2 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.289298 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTAAGG CAATTAAGCT ACCCCAAAAA CTAATGTTAT TGGGGTCAGG TGAGTTGGGC 
AAAGAATTTG TCATTGCGGC TCAACGTCTT GGTAATTATG TGATAGCCGT TGACCGCTAC
GCCAACGCAC CCGCGATGCA GGTTGCTGAT TTTTGTGAAG TAATATCAAT GCTTAGTGCT
GATGATTTAG AAGCTGTAGT CACTAAGTAT CAACCTGATT TTATCATACC AGAGATTGAA
GCAATTAGAA CCGAGAAACT ACAGGAATTT GAAGACAGAG GTATCACTGT CATCCCCACT
GCGGCAGCTA CGAATTATAC AATGAACCGC GATCGCATTC GGGAATTAGC CCATGAAGAA
TTAGGTATTA GAACCGCGAA ATATGGTTAT GCTATTACTT TAGAAGAATT GATTGCTGTT
TCTGATGAGA TAGGTTTTCC CAATGTAGTC AAACCTGTGA TGTCGTCCTC AGGTAAGGGA
CAATCGGTAG TAGCTACAAA AGAGGAAGTA GAAAAAGCTT GGAATTATGC GATCGCTAAT
TCTCGTGGTG ATAGTCAAAA AGTCATCGTC GAAGAATTTA TCAACTTTGA AATTGAAATA
ACTCTCCTCA CCATTAAACA GTGGGATAGT CCGACAATTT TCTGTTCACC CATCGGACAC
CGTCAAGAAC GAGGCGATTA TCAAGAATCT TGGCAACCGG CCGGCATTAG TGAAGATAAG
ATATTAGAAG CGCAAGCCAT AGCCAAAAAA GTCACAGATG CTTTAGGCGG TGCTGGCATA
TTTGGGGTAG AATTTTTCAT TACCAAAGAC GAAGTAATCT TTTCTGAACT ATCACCTCGT
CCCCACGATA CGGGAATGGT GACATTAATT TCACAAAATT TGAACGAATT TGAGTTACAT
TTACGAGCAA TTTTAGGCTT ACCCATTCCC AAAATAGAAC AGTTGGGGCC TTCAGCCAGT
GCCGTAATTT TAGCATCAGA AAAATTAGAT GCACCCGTGT TTACGGGTAT CGCCGAAGCA
TTAGCCGCAC CAGACGTAGA TATTAGACTA TTTGGTAAAC CCACAGCACA TCCTTACCGC
CGTATGGGTG TCGCCTTAGC CAAAGCCGAG AATGTGCAAG CCGCTAGGGA GAAAGCGACA
GACGCAGCAA GTAAAATCCA AATCAGTAGT CAATAA
 
Protein sequence
MSKAIKLPQK LMLLGSGELG KEFVIAAQRL GNYVIAVDRY ANAPAMQVAD FCEVISMLSA 
DDLEAVVTKY QPDFIIPEIE AIRTEKLQEF EDRGITVIPT AAATNYTMNR DRIRELAHEE
LGIRTAKYGY AITLEELIAV SDEIGFPNVV KPVMSSSGKG QSVVATKEEV EKAWNYAIAN
SRGDSQKVIV EEFINFEIEI TLLTIKQWDS PTIFCSPIGH RQERGDYQES WQPAGISEDK
ILEAQAIAKK VTDALGGAGI FGVEFFITKD EVIFSELSPR PHDTGMVTLI SQNLNEFELH
LRAILGLPIP KIEQLGPSAS AVILASEKLD APVFTGIAEA LAAPDVDIRL FGKPTAHPYR
RMGVALAKAE NVQAAREKAT DAASKIQISS Q