Gene Ava_3009 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_3009 
Symbol 
ID3681186 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp3732320 
End bp3734131 
Gene Length1812 bp 
Protein Length603 aa 
Translation table11 
GC content41% 
IMG OID637718355 
Producthistidine kinase 
Protein accessionYP_323514 
Protein GI75909218 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase
[COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.176735 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGCAGT ATTCAAGCTT ACCAGAACAC AACTCATCGA TAGACACAAC GCCGACTCTG 
TTGGCAAAAA GTCAGCAGCT TTGCGCTGAG TTATGGCTGG AACGCAGCTT GAACCAGCTA
CAAACACGCC TGCTTAATTG CTTAGAGTCT GCTTTCAACA GTGTTCCCAC AAGAACCACA
GAAGCGGATA TTTTCCAAAC AGTGGTTAAT GAACTAGACA TTGCTTTAAA CAATAGCAAT
GTGGGTTTTC CTTTGTGTGC TGTGGGGATT GCTCTGTTGC AACCGCAAGC AGCAGTTGGT
AAAGTTTACT ATATTTCTCG CCCTCTATCT CTAGGCTGTC AACCTCCACT CTTAGAAGAA
ATATCCAAAG ACGGGAAAAA ACTGCGGTTG CAATTGCAAG AAGCGATCAA AATTACAGAT
TTACAAAAAC TAGAAAAGCA ACAACCTCCA CAAGCTTGGC AATTAAGGGA TGATGCTGAT
GGTGTGATCG GGTGGTTACT TCTGGCGACA GATAACTCAA AGCCTCATGA AAACGCATTC
ACAGCACCAC ATCCTCAACT TAATACGCAA CTCATGGAGC GATCGGCCGA ACAATGTGTG
AAAGCCTTAG CACATCTCAA AAAAATACAA TCTTTGCAGC AGAAATCTCA AAATTTAGGT
ATTTCTAATC AGGAATTGGA GCGGACTAAT CAACTGAAAA ATCAGTTTTT AGCCAATACA
AGTCATGAAA TTCGCACACC CCTAAGTTCG ATTATTGGTT TTACTCACCT GCTTCTAGCG
CAAGGTTACG ATCCAACGAG AGAGCGCCAT CATGAATATT TAAATATTAT TCAATCTAGT
GGTAAACATC TATTGGCTCT GATTAACGAT ATTTTGGATC TCTCCAAGAT TGAGGCTAAT
CAGTTAGAAG TACAGTGGGA AAAGGTGAAT GTACCAGAAC TTTGTCAAAA TGTATTAACG
CTGATCAAGG AGAAGGCCGC AAATAAAGGG GTGAAATTGT CTTTGGAATT AGATCCCCAT
ATCAAGACTT TTGTTGCTGA CCCTTTGCGG CTCAAACAGA TGCTTTTGAA CTTGTTATTT
AATGCTCTCA AATTTACTAA TCAAGGCACT GTTGGCTTAA AGGTGACACA GCGAGAGTCA
TTTATCCACT TTACAGTCTG GGACACTGGT AGCGGTATTT CTCCAGAAAA TCTGGCGCTA
CTGTTTCAAC CATATTTCCA AATTCCTAAT TCTTCAGTTG CCCAACATGA AGGTACTGGT
TTAGGTTTAG TGGTGACTCG TAAACTGGCA GAAATTCACA ATGGTTCTGT AGAAGTAGAA
TCCCAAGTTG ATCACGGTTC CCGCTTCACT ATTATCTTGC CTCTACAACA GAATGGGCAA
GTATTAGTAG GAGAAGATAT GGAGGATGAG GAAACGACAT CTCCTGCATC TTTGACACCT
AACAGTTCAA AAGACATTTT GTTAGTTGAG GATGATTTAC CCAACGGTGA ATTGATGCAA
ACTCACTTGT CTAAGTTGGG ATATAACGTT ACTTGGGTCA AGAATGCCCA TGAAATGTGG
GCAAAACTAG ACCAACAACA AGCAGCAGTT ATCTTAATGG ATATCCGGTT ACCAGATGGT
GATGGTTTAG ATTTAGTCAA GCAGTTGCGA GAAAAATCTC AATATCAACA GATTCCTATT
ATTGCCCAAA CAGCGATGGC GATGAAAGGC GATCGCTCTA TCTGTCTATC TGCTGGAGTC
AACGACTATA TTTCTAAACC CATAGATTTA AATCTTTTGG CCAGTCTGGT GGCTAAGTAT
AGTCAGCTTT AG
 
Protein sequence
MQQYSSLPEH NSSIDTTPTL LAKSQQLCAE LWLERSLNQL QTRLLNCLES AFNSVPTRTT 
EADIFQTVVN ELDIALNNSN VGFPLCAVGI ALLQPQAAVG KVYYISRPLS LGCQPPLLEE
ISKDGKKLRL QLQEAIKITD LQKLEKQQPP QAWQLRDDAD GVIGWLLLAT DNSKPHENAF
TAPHPQLNTQ LMERSAEQCV KALAHLKKIQ SLQQKSQNLG ISNQELERTN QLKNQFLANT
SHEIRTPLSS IIGFTHLLLA QGYDPTRERH HEYLNIIQSS GKHLLALIND ILDLSKIEAN
QLEVQWEKVN VPELCQNVLT LIKEKAANKG VKLSLELDPH IKTFVADPLR LKQMLLNLLF
NALKFTNQGT VGLKVTQRES FIHFTVWDTG SGISPENLAL LFQPYFQIPN SSVAQHEGTG
LGLVVTRKLA EIHNGSVEVE SQVDHGSRFT IILPLQQNGQ VLVGEDMEDE ETTSPASLTP
NSSKDILLVE DDLPNGELMQ THLSKLGYNV TWVKNAHEMW AKLDQQQAAV ILMDIRLPDG
DGLDLVKQLR EKSQYQQIPI IAQTAMAMKG DRSICLSAGV NDYISKPIDL NLLASLVAKY
SQL