Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ava_3009 |
Symbol | |
ID | 3681186 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anabaena variabilis ATCC 29413 |
Kingdom | Bacteria |
Replicon accession | NC_007413 |
Strand | + |
Start bp | 3732320 |
End bp | 3734131 |
Gene Length | 1812 bp |
Protein Length | 603 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 637718355 |
Product | histidine kinase |
Protein accession | YP_323514 |
Protein GI | 75909218 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0642] Signal transduction histidine kinase [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.176735 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAGCAGT ATTCAAGCTT ACCAGAACAC AACTCATCGA TAGACACAAC GCCGACTCTG TTGGCAAAAA GTCAGCAGCT TTGCGCTGAG TTATGGCTGG AACGCAGCTT GAACCAGCTA CAAACACGCC TGCTTAATTG CTTAGAGTCT GCTTTCAACA GTGTTCCCAC AAGAACCACA GAAGCGGATA TTTTCCAAAC AGTGGTTAAT GAACTAGACA TTGCTTTAAA CAATAGCAAT GTGGGTTTTC CTTTGTGTGC TGTGGGGATT GCTCTGTTGC AACCGCAAGC AGCAGTTGGT AAAGTTTACT ATATTTCTCG CCCTCTATCT CTAGGCTGTC AACCTCCACT CTTAGAAGAA ATATCCAAAG ACGGGAAAAA ACTGCGGTTG CAATTGCAAG AAGCGATCAA AATTACAGAT TTACAAAAAC TAGAAAAGCA ACAACCTCCA CAAGCTTGGC AATTAAGGGA TGATGCTGAT GGTGTGATCG GGTGGTTACT TCTGGCGACA GATAACTCAA AGCCTCATGA AAACGCATTC ACAGCACCAC ATCCTCAACT TAATACGCAA CTCATGGAGC GATCGGCCGA ACAATGTGTG AAAGCCTTAG CACATCTCAA AAAAATACAA TCTTTGCAGC AGAAATCTCA AAATTTAGGT ATTTCTAATC AGGAATTGGA GCGGACTAAT CAACTGAAAA ATCAGTTTTT AGCCAATACA AGTCATGAAA TTCGCACACC CCTAAGTTCG ATTATTGGTT TTACTCACCT GCTTCTAGCG CAAGGTTACG ATCCAACGAG AGAGCGCCAT CATGAATATT TAAATATTAT TCAATCTAGT GGTAAACATC TATTGGCTCT GATTAACGAT ATTTTGGATC TCTCCAAGAT TGAGGCTAAT CAGTTAGAAG TACAGTGGGA AAAGGTGAAT GTACCAGAAC TTTGTCAAAA TGTATTAACG CTGATCAAGG AGAAGGCCGC AAATAAAGGG GTGAAATTGT CTTTGGAATT AGATCCCCAT ATCAAGACTT TTGTTGCTGA CCCTTTGCGG CTCAAACAGA TGCTTTTGAA CTTGTTATTT AATGCTCTCA AATTTACTAA TCAAGGCACT GTTGGCTTAA AGGTGACACA GCGAGAGTCA TTTATCCACT TTACAGTCTG GGACACTGGT AGCGGTATTT CTCCAGAAAA TCTGGCGCTA CTGTTTCAAC CATATTTCCA AATTCCTAAT TCTTCAGTTG CCCAACATGA AGGTACTGGT TTAGGTTTAG TGGTGACTCG TAAACTGGCA GAAATTCACA ATGGTTCTGT AGAAGTAGAA TCCCAAGTTG ATCACGGTTC CCGCTTCACT ATTATCTTGC CTCTACAACA GAATGGGCAA GTATTAGTAG GAGAAGATAT GGAGGATGAG GAAACGACAT CTCCTGCATC TTTGACACCT AACAGTTCAA AAGACATTTT GTTAGTTGAG GATGATTTAC CCAACGGTGA ATTGATGCAA ACTCACTTGT CTAAGTTGGG ATATAACGTT ACTTGGGTCA AGAATGCCCA TGAAATGTGG GCAAAACTAG ACCAACAACA AGCAGCAGTT ATCTTAATGG ATATCCGGTT ACCAGATGGT GATGGTTTAG ATTTAGTCAA GCAGTTGCGA GAAAAATCTC AATATCAACA GATTCCTATT ATTGCCCAAA CAGCGATGGC GATGAAAGGC GATCGCTCTA TCTGTCTATC TGCTGGAGTC AACGACTATA TTTCTAAACC CATAGATTTA AATCTTTTGG CCAGTCTGGT GGCTAAGTAT AGTCAGCTTT AG
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Protein sequence | MQQYSSLPEH NSSIDTTPTL LAKSQQLCAE LWLERSLNQL QTRLLNCLES AFNSVPTRTT EADIFQTVVN ELDIALNNSN VGFPLCAVGI ALLQPQAAVG KVYYISRPLS LGCQPPLLEE ISKDGKKLRL QLQEAIKITD LQKLEKQQPP QAWQLRDDAD GVIGWLLLAT DNSKPHENAF TAPHPQLNTQ LMERSAEQCV KALAHLKKIQ SLQQKSQNLG ISNQELERTN QLKNQFLANT SHEIRTPLSS IIGFTHLLLA QGYDPTRERH HEYLNIIQSS GKHLLALIND ILDLSKIEAN QLEVQWEKVN VPELCQNVLT LIKEKAANKG VKLSLELDPH IKTFVADPLR LKQMLLNLLF NALKFTNQGT VGLKVTQRES FIHFTVWDTG SGISPENLAL LFQPYFQIPN SSVAQHEGTG LGLVVTRKLA EIHNGSVEVE SQVDHGSRFT IILPLQQNGQ VLVGEDMEDE ETTSPASLTP NSSKDILLVE DDLPNGELMQ THLSKLGYNV TWVKNAHEMW AKLDQQQAAV ILMDIRLPDG DGLDLVKQLR EKSQYQQIPI IAQTAMAMKG DRSICLSAGV NDYISKPIDL NLLASLVAKY SQL
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