Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ava_2987 |
Symbol | |
ID | 3681222 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anabaena variabilis ATCC 29413 |
Kingdom | Bacteria |
Replicon accession | NC_007413 |
Strand | - |
Start bp | 3705334 |
End bp | 3706422 |
Gene Length | 1089 bp |
Protein Length | 362 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 637718333 |
Product | 3-isopropylmalate dehydrogenase |
Protein accession | YP_323492 |
Protein GI | 75909196 |
COG category | [C] Energy production and conversion [E] Amino acid transport and metabolism |
COG ID | [COG0473] Isocitrate/isopropylmalate dehydrogenase |
TIGRFAM ID | [TIGR00169] 3-isopropylmalate dehydrogenase |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.0123626 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.372327 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACTCAGA ACTATCGAAT TACCCTACTC CCTGGCGATG GAATTGGCCC TGAAATTATG GCAGTGGCGG TAGATGTGCT GAAAGTCGTA GGGCAGCAAT TTGATATTCA GTTTGATTTC CAAGAAGCTT TGATTGGCGG TGCAGCGATT GACGCGACTG GCGAACCTCT GCCATCGGCT ACTTTAGATA CTTGTCGCCA AAGTGATGCT GTATTACTCG CTGCTATTGG TGGTTATAAG TGGGATTCCT TACCCCCTCA CCAACGCCCA GAAGGGGGCT TGCTGGGATT GCGGGCGGGA TTAGAATTAT TTGCCAATTT ACGCCCAGCC CAAATTTTAC CGCAGTTAAT TGACGCTTCG ACTTTGAAGC GGGAAGTTGT GGAAGGTGTA GATATTATGG TGGTGCGGGA ACTCACTGGT GGCATTTACT TTGGTAAACC CAGAGGTATC TTTACTACTG AGACTGGTGA GAAACGTGGT GTTAATACGA TGGTTTATAC AGAATCAGAA ATTGACCGAA TTGGCCGGAT AGCTTTTGAG ACTGCGCGCA AACGTCGGGG CAAACTCTGT TCAGTAGATA AAGCTAATGT ATTAGATGTA TCCCAATTGT GGCGCGATCG CATCACCAAA CTTTCCCAAG AATACCCGGA TGTGGAACTT TCCCATCTAT ATGTAGATAA TGCCGCTATG CAATTGGTAC GCGCTCCTAA GCAGTTCGAT ACCATCGTTA CAGGCAACTT GTTTGGGGAT ATTCTCTCGG ATGCGGCTGC TATGCTCACG GGTAGTATTG GAATGTTACC TTCAGCTAGC CTTGGGGCTT CTGGGCCGGG AGTATTTGAG CCAGTCCACG GTTCTGCCCC AGATATCGCA GGACTTGATA AAGCCAACCC CCTTGCCCAA GTTTTAAGTG CGGCGATGAT GTTGCGTTAC GCTTTAAACC AACCACAAGC AGCAGACAAA ATAGAACAGG CTGTGTTACA AGTTTTAGAG CAAGGCGATC GCACAGGGGA TATAATGTCG GTGGGTATGA ATCTTTTGGG TTGCCGGGCT ATGGGTGACT CCCTCATTAA AGCATTAGAA AAATCATAA
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Protein sequence | MTQNYRITLL PGDGIGPEIM AVAVDVLKVV GQQFDIQFDF QEALIGGAAI DATGEPLPSA TLDTCRQSDA VLLAAIGGYK WDSLPPHQRP EGGLLGLRAG LELFANLRPA QILPQLIDAS TLKREVVEGV DIMVVRELTG GIYFGKPRGI FTTETGEKRG VNTMVYTESE IDRIGRIAFE TARKRRGKLC SVDKANVLDV SQLWRDRITK LSQEYPDVEL SHLYVDNAAM QLVRAPKQFD TIVTGNLFGD ILSDAAAMLT GSIGMLPSAS LGASGPGVFE PVHGSAPDIA GLDKANPLAQ VLSAAMMLRY ALNQPQAADK IEQAVLQVLE QGDRTGDIMS VGMNLLGCRA MGDSLIKALE KS
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