Gene Ava_2953 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_2953 
Symbol 
ID3681323 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp3659166 
End bp3659693 
Gene Length528 bp 
Protein Length175 aa 
Translation table11 
GC content46% 
IMG OID637718300 
Productphosphoribosylaminoimidazole carboxylase catalytic subunit 
Protein accessionYP_323459 
Protein GI75909163 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0041] Phosphoribosylcarboxyaminoimidazole (NCAIR) mutase 
TIGRFAM ID[TIGR01162] phosphoribosylaminoimidazole carboxylase, PurE protein 


Plasmid Coverage information

Num covering plasmid clones39 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTCCCT TAGTTGGCAT TATTATGGGT AGCGATTCAG ATTTGCCCAC GATGAAAGAG 
GCGATCGCTA TTTGTGAGGA ATTTGGTGTA GAAAATGAAG TGGCGATCGT TTCTGCCCAT
CGCACCCCAG AACGTATGGT GGAATATGCC CAAACAGCCC ACCATCGGGG TATCAAGGTG
ATTATTGCTG GTGCAGGCGG TGCAGCCCAT CTTCCCGGCA TGGTAGCATC TTTAACTCCT
CTACCAGTAA TTGGTGTGCC AGTCGCTACC AGAAACTTAC AAGGTGTGGA TTCTTTATAT
TCAATTGTAC AGATGCCTGG GGGTATTCCT GTGGCTACGG TGGCGATCGG TAACGCCAAA
AATGCCGGAC TATTGGCTGT GCAAATCCTC GCTACTCAAC AGCCAGAATT ATTAACTAAA
GTCCAAGCAT ACCGTCAAAA CCTATCTGAC TCAGTAATGA CAAAGCAAGC AAAGTTAGAA
CAACTAGGTT ACAAGCAGTA TTTGCAACAG GAGATGCTTG GAAAATAA
 
Protein sequence
MAPLVGIIMG SDSDLPTMKE AIAICEEFGV ENEVAIVSAH RTPERMVEYA QTAHHRGIKV 
IIAGAGGAAH LPGMVASLTP LPVIGVPVAT RNLQGVDSLY SIVQMPGGIP VATVAIGNAK
NAGLLAVQIL ATQQPELLTK VQAYRQNLSD SVMTKQAKLE QLGYKQYLQQ EMLGK