| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ava_2942 |
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| Symbol | |
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| ID | 3681371 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Anabaena variabilis ATCC 29413 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007413 |
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| Strand | + |
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| Start bp | 3645529 |
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| End bp | 3648510 |
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| Gene Length | 2982 bp |
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| Protein Length | 993 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 637718289 |
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| Product | L-proline dehydrogenase / delta-1-pyrroline-5-carboxylate dehydrogenase |
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| Protein accession | YP_323448 |
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| Protein GI | 75909152 |
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| COG category | [C] Energy production and conversion
[E] Amino acid transport and metabolism |
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| COG ID | [COG0506] Proline dehydrogenase
[COG1012] NAD-dependent aldehyde dehydrogenases |
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| TIGRFAM ID | [TIGR01237] delta-1-pyrroline-5-carboxylate dehydrogenase, group 2, putative
[TIGR01238] delta-1-pyrroline-5-carboxylate dehydrogenase (PutA C-terminal domain) |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGTATTAC AAGTACAAAC CAGCACCTAC GAAGCAAAAA CTCAAGAAAT TGCTAGACAA
TTATTAGGAG CAACTCAAGA AAATCGCTCG TTTTTTGCTT CTTTACGTGA TCAAATGCGT
TGGGATGATA AATTACTGGC TTGGGCGATG AGTAATCCCG GTTTACGGGT GCAATTATTT
CGGTTTATTG ATACTTTACC CGCATTGCAT AGTAAAGCGG AAATTGCTGC ACATTTACAA
GAATATTTAG GGGATGAATC TGTTGAACTT CCTGCCGCTT TAAAGGGAAT GCTCAATTTT
GCCAACCCTG ACTCTGTGCC GGGACAAGTG GCTGCAACTA CCGTCTCTAC AGCAGTTGAG
ACTTTAGCTC ATAAATATAT TTCTGGGGAA AATATTAAAC AAGTCATCAA GACAGTTGAA
CGACTACGAA AAGAAAAAAT GGCCTTCACC ATTGACTTAC TTGGTGAGGC GGTAATTACA
GAAACAGAGG CACAATCTTA TCTAGAAAGG TATCTAGAAT TAATTAGCCA ATTAACAGAA
GCATCGAAGA ATTGGGGAAC TGTTGGGGCT ATTGATGAAG CAGATGGCGA ACAGCTAGCA
AAAGTCCAGG TTTCTGTGAA GTTAACGGCG TTTTATTCCC AATTTGACCC ATTAGATGCT
AAAGGTAGTG AGGAGAAAGT TAGCGATCGC ATTCGCATTT TATTACGTCG TGCTAAGGAG
TTAGGGGCGG CTATCCATTT TGATATGGAA CAGTATGCTT ATAAAAACTT AACTTTAAAT
ATTTTGCAAA AAATCTTATT AGAAGATGAG TTTCGTCAAC GTACAGATAT TGGCATCACA
ATTCAAGCAT ACCTAAGAGA TAGTGAGCAA GATGCCAGAA ATGCGATCGC TTGGTTGAAA
CAGCGCGGTT ATCCTTTAAC TATTCGCTTG GTAAAAGGGG CTTATTGGGA TCAGGAAACT
ATTAAAGCGG CGCAAAAGCA TTGGCCACAG CCTGTTTTTA ATGATAAGGC GGCGACAGAT
GCCAATTTTG AGGCGATAAC TCAGTTATTG CTGGAAAATA ACCAGTATGT TTATTCTGCC
ATTGGTAGTC ATAATGTGCG ATCGCAAGCT TTGGCTATAG CGATTGCGGA AACTTTGCAG
GTTCCCCGGC GGCGGTTTGA GATGCAGGTG CTGTACGGGA TGGGGGATAA GTTAGCGAAG
GCTTTGGTTG ATCGGGGTTA TCGGGTGCGG GTTTATTGTC CTTATGGTGA TTTGTTACCG
GGGATGGCTT ACCTGATTCG GCGGTTGTTG GAGAATACGG CGAATAGTTC TTTTTTACGG
CAAAATTTGG AGAATCGGCC TGTAGAGGAA TTATTGGCGG CTCCAGATAT TAATTTGGCT
CACGCAAAGG CGCAGAGAAG CAAAGAGGAG AAGGGTTCTT TTGGGGCGAC GGATACGGAT
TTCGCGGTGG AGGAGGAGAG AAAGGAGGCG GCGCGGGCTT TTGCGGAGGT GCGTGGGGCG
TTGGGGCGGA GTTATTTACC TCTGATTAAT GGGGAGTATG TGCAGACGGC GGAGGTGATT
GATTCTGTTA ATCCTTCTAA TTTTGGTGAG GTGATTGGGA AGGTTGGGTT GATTAGTGTG
GAACAGGCGG AACAGGCGAT GCAGGCGGCG AAGGCGGCGT TTCCAGGTTG GCGGCGGACT
CCGGTGAAGG AACGGGCGGC GATTTTGCGA CGGGCTGGTG ATTTGTTGGA GGAGCGTCGG
GCGGAACTTT CGGCTTGGAT AGTTTTGGAG GTGGGTAAGC CTGTTAAGGA AGCAGATGCA
GAGGTTTCGG AGGCGATCGA TTTTTGTCGC TATTACGCTG ATGAGATGGA ACGGCTGTAT
CAGGGTATAA ATTATGATGT GGCTGGGGAA ACAAATCGTT ATATTTACCA GCCACGGGGT
ATTGTGGTGG TGATTTCTCC TTGGAATTTT CCTTTGGCGA TAGCCTGTGG CATGACTGTT
GCTGCTTTGG TTACAGGCAA TTGCACTCTG CTGAAGCCGG CGGAAACTTC TTCTGTGATT
ACTGCCAAAT TAACGGAGAT TTTGCTAGAA GCCGGTATAC CTAAAGGTGT ATTTCAATAC
GTCCCCGGTA AGGGTTCTCA AGTCGGGGCT TATTTGGTAA GTCATCCTGA TACTCATCTG
ATTGCTTTTA CAGGTTCTCA GGAAGTTGGT TGTCGGATTT ATGCTGAAGC AGCTACCCTA
AAACCCCAAC AAAGGCACAT GAAGCGGGTA ATTGCGGAAA TGGGCGGGAA GAATGCCATC
ATTGTGGATG AAAGTGCTGA TTTAGACCAA GCCGTTATCG GGGTGGTACA GTCAGCTTTT
GGTTACAGTG GGCAAAAATG TTCTGCTTGT TCGCGGGTGA TAGTAGTAGA AGCCATTTAT
GATGCTTTTA TCCATCGGTT GGTGGAGGCG ACAAAATCTT TAAATATTGG TGAGGCGGAG
TTACCAAGTA CTCAAGTCGG CCCGGTGATT GATGCCAATG CCCGCGATCG CATCCGCGAG
TATATTGAGA AAGGTAAGGC AGAATCTCAG GTGGCGTTGG AGTTAAGCGC ACCCAACCAC
GGCTATTTTG TTGGGCCTGT CATTTTTGGG GAAGTTCCAC CTCATGGCAC AATAGCCCAG
CAAGAGATTT TTGGCCCTGT GTTGGCGGTA ATCAAAGCCA AAGATTTTGC CCAAGCCTTA
GCCATTGCCA ATGATACCGA CTACGCCTTG ACTGGCGGGC TTTATTCCCG CACACCTTCC
CATATTCAAC AAGCCCAGGA AGAGTTTGAA GTGGGTAACT TATATATCAA CCGTAACATT
ACAGGGGCGA TCGTTGCGAG ACAACCCTTT GGCGGTTTCA AACTTTCTGG TGTTGGTTCC
AAAGCCGGCG GCCCTGACTA TCTCTTGCAA TTCCTAGAAC CACGGACAAT TACAGAAAAC
ATTCAGCGCC AAGGTTTTGC ACCAATTGAA GGAGCAGAAT AA
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| Protein sequence | MVLQVQTSTY EAKTQEIARQ LLGATQENRS FFASLRDQMR WDDKLLAWAM SNPGLRVQLF
RFIDTLPALH SKAEIAAHLQ EYLGDESVEL PAALKGMLNF ANPDSVPGQV AATTVSTAVE
TLAHKYISGE NIKQVIKTVE RLRKEKMAFT IDLLGEAVIT ETEAQSYLER YLELISQLTE
ASKNWGTVGA IDEADGEQLA KVQVSVKLTA FYSQFDPLDA KGSEEKVSDR IRILLRRAKE
LGAAIHFDME QYAYKNLTLN ILQKILLEDE FRQRTDIGIT IQAYLRDSEQ DARNAIAWLK
QRGYPLTIRL VKGAYWDQET IKAAQKHWPQ PVFNDKAATD ANFEAITQLL LENNQYVYSA
IGSHNVRSQA LAIAIAETLQ VPRRRFEMQV LYGMGDKLAK ALVDRGYRVR VYCPYGDLLP
GMAYLIRRLL ENTANSSFLR QNLENRPVEE LLAAPDINLA HAKAQRSKEE KGSFGATDTD
FAVEEERKEA ARAFAEVRGA LGRSYLPLIN GEYVQTAEVI DSVNPSNFGE VIGKVGLISV
EQAEQAMQAA KAAFPGWRRT PVKERAAILR RAGDLLEERR AELSAWIVLE VGKPVKEADA
EVSEAIDFCR YYADEMERLY QGINYDVAGE TNRYIYQPRG IVVVISPWNF PLAIACGMTV
AALVTGNCTL LKPAETSSVI TAKLTEILLE AGIPKGVFQY VPGKGSQVGA YLVSHPDTHL
IAFTGSQEVG CRIYAEAATL KPQQRHMKRV IAEMGGKNAI IVDESADLDQ AVIGVVQSAF
GYSGQKCSAC SRVIVVEAIY DAFIHRLVEA TKSLNIGEAE LPSTQVGPVI DANARDRIRE
YIEKGKAESQ VALELSAPNH GYFVGPVIFG EVPPHGTIAQ QEIFGPVLAV IKAKDFAQAL
AIANDTDYAL TGGLYSRTPS HIQQAQEEFE VGNLYINRNI TGAIVARQPF GGFKLSGVGS
KAGGPDYLLQ FLEPRTITEN IQRQGFAPIE GAE
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