| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ava_2924 |
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| Symbol | |
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| ID | 3681392 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Anabaena variabilis ATCC 29413 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007413 |
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| Strand | + |
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| Start bp | 3630341 |
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| End bp | 3631279 |
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| Gene Length | 939 bp |
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| Protein Length | 312 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 637718271 |
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| Product | ribosomal large subunit pseudouridine synthase D |
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| Protein accession | YP_323430 |
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| Protein GI | 75909134 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0564] Pseudouridylate synthases, 23S RNA-specific |
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| TIGRFAM ID | [TIGR00005] pseudouridine synthase, RluA family |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.459608 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.0830361 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTGAACG AATTTTACCT AGAAGTTGAA GAAAACAGCG CACGCATCGA CCGTTACCTC
GCAGAAGAAT TACCAGATTT ATCCCGTTCT CGGATTCAGC AGTTAATTGA ACAGGGGAAA
GTCCAAGTTA ATGGCAAAGT TTGCACATCT AAAAAGATTA ACCTGAAAGT AGGCGATCGC
ATCACTTTAG AGGTTCCCGA AGCGCAACCT CTAGAACTAC AAGCAGAAGA TATCCCCTTA
GATATTCTCT ACGAAGATGA CCAGTTACTC ATTCTTAACA AGCCGGCTGG TTTAGTCGTC
CACCCTGCAC CAGGACATTC TCATGGCACA TTGGTAAATG CTTTGTTGGC ACATTGTCCT
CATCTTCCTG GTATTGGTGG TGTGCAGAGG CCGGGAATCG TCCATCGTTT AGATAAAGAT
ACAACAGGGG CAATTGCGAT CGCTAAAACC GACATCGCGT ATAAACACAT CCAAGCACAA
CTCCAAACCA AAACCGCACG ACGAGAATAT TTAGGTGTAG TTTACGGTGC GCCAAAAACT
TCAAGTGGCA AAGTAGATTT ACCCATCGGT CGCCATCCCC AAGACCGCAA GAAAATGGCT
ATTGTCCCTG TAGAAGAAGG GGGAAGGTCA GCCATCACCC ATTGGCAAAT ACAGGAACGC
TTGGGAAACT TCACCCTAAT TCATTTCCAA CTCGAAACCG GACGCACTCA CCAAATTCGA
GTTCACAGCG CCAAAATAGG TCATCCTATC GTCGGCGACC CCGTTTATGG TTCCGGTCGT
TCTGTTGGTG TAAATTTACC TGGTCAAGCA CTCCACGCTT GGAGATTGAG ATTGCAACAT
CCAATTACAG GAGATTGGGT TGAAGTTACG GCAACGCCTC CACAAAGTTT TACAACGCTC
CTAGAAATTC TTAGACGCAG AGCAGCTATC TCTTCTTAA
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| Protein sequence | MLNEFYLEVE ENSARIDRYL AEELPDLSRS RIQQLIEQGK VQVNGKVCTS KKINLKVGDR
ITLEVPEAQP LELQAEDIPL DILYEDDQLL ILNKPAGLVV HPAPGHSHGT LVNALLAHCP
HLPGIGGVQR PGIVHRLDKD TTGAIAIAKT DIAYKHIQAQ LQTKTARREY LGVVYGAPKT
SSGKVDLPIG RHPQDRKKMA IVPVEEGGRS AITHWQIQER LGNFTLIHFQ LETGRTHQIR
VHSAKIGHPI VGDPVYGSGR SVGVNLPGQA LHAWRLRLQH PITGDWVEVT ATPPQSFTTL
LEILRRRAAI SS
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