Gene Ava_2907 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_2907 
Symbol 
ID3681412 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp3612310 
End bp3612990 
Gene Length681 bp 
Protein Length226 aa 
Translation table11 
GC content43% 
IMG OID637718252 
Productmembrane protein 
Protein accessionYP_323413 
Protein GI75909117 
COG category[S] Function unknown 
COG ID[COG0344] Predicted membrane protein 
TIGRFAM ID[TIGR00023] acyl-phosphate glycerol 3-phosphate acyltransferase 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00000899467 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGGCTTGT GGTTGAGTTT ATGCGGTGCA GTGGTAGTGG TGGCTTACCT GTTGGGTTCT 
TTTCCTACGG GATATATTGC TGTAAAACAA TTGAAGGGGA TTGATATTCG TGAAGTGGGT
TCTGGTTCCA CTGGAGCAAC CAATGTTCTG AGAACCTTGG GTAAAGGGCC TGGAGCATTT
GTTTTAGGAC TTGACTGCTT AAAAGGCGTA TTGGCGATCG CTTTAGTTGA CTATTTATTC
AACTTTGCCA CTAGTCAAAA TTTGATTCCT ACAACGGTAA ATGTTCAACT GTGGCAACCT
TGGTTAGTGA CTCTAGCAGG TATAGCCGCC ATTTTAGGAC ATAGTAAATC AATTTTCTTA
GGCTTTACAG GCGGCAAATC TGTTGCTACC AGCTTAGGGA TTTTATTAGC CATGAATTGG
CAGGTGGGTT TGGCTACCTT TGGTGTATTT GCTGTTGTGG TAGCAATATC AAGGATTGTA
TCACTTAGTT CCATCATGGG GGCGATCGCC GTCTCTATTG TGATGGTGGT TTTACAGCAA
CCCTTACCCT ACATTTTATT TGGTATCGCT GGTGGCTTGT ATGTTATTTT GCGTCACCGG
AGTAATATTG AGCGTTTGCT AGCAGGTACA GAACCAAAAA TTGGGCAGAA ACTAACAACA
GAAACAGAAC AGAGTGCTTA A
 
Protein sequence
MGLWLSLCGA VVVVAYLLGS FPTGYIAVKQ LKGIDIREVG SGSTGATNVL RTLGKGPGAF 
VLGLDCLKGV LAIALVDYLF NFATSQNLIP TTVNVQLWQP WLVTLAGIAA ILGHSKSIFL
GFTGGKSVAT SLGILLAMNW QVGLATFGVF AVVVAISRIV SLSSIMGAIA VSIVMVVLQQ
PLPYILFGIA GGLYVILRHR SNIERLLAGT EPKIGQKLTT ETEQSA