Gene Ava_2902 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_2902 
Symbol 
ID3681407 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp3605669 
End bp3608350 
Gene Length2682 bp 
Protein Length893 aa 
Translation table11 
GC content47% 
IMG OID637718247 
ProductType III restriction enzyme, res subunit 
Protein accessionYP_323408 
Protein GI75909112 
COG category[L] Replication, recombination and repair 
COG ID[COG4581] Superfamily II RNA helicase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value2.84094e-07 
Fosmid HitchhikerNo 
Fosmid clonabilityunclonable 
 

Sequence

Gene sequence
GTGAATTATC CCGCGCCGTC TCCCGAACTG GACTTAGGGT TGATATTTCC CTTTGATCTG 
GATCAGTTTC AAAAAGATGC GATCGCGTCC CTTAACGCGG GACGCTCTGT TGTCGTGTGT
GCGCCCACAG GTTCGGGCAA AACTTTAGTA GGAGAATATG CCATTTATCG TGCTTTAGCA
CGGGGGAAGA GGGTGTTTTA CACCACTCCC TTAAAGGCGT TATCTAATCA AAAATTACGT
GATTTTCGTG AGAAATTTGG GTTTGAGCAA GTTGGACTGT TAACTGGTGA TGCTTCCATC
AACAGAGACG CGCCAATTTT GGTGATGACT ACCGAGATTT TTCGGAATAT GCTCTACGGT
ACACCAATCG GGCAAGTCGG TATCTCTCTT GTGGATGTGG AAGCGGTGGT ACTAGATGAA
TGCCACTACA TGAACGATCG CCAACGGGGT ACAGTCTGGG AAGAGTCAAT CATTTACTGT
CCTCGTGGAG TACAGCTAGT AGCCTTATCC GCTACTGTCG CCAATAGTGA CCAACTTACC
GATTGGCTAA GTCGCGTCCA CGGTCCCACT GATCTGATTT ACTCTGATTT TCGCCCTGTA
CCCTTAGAGT TTCACTACTG CAATCCCAAG GGACTTTTTC CCCTGTTGAA TGATAGCAAA
ACTAAAATTA ATCCCCGTCT AGCCAATAGA GGTAAAAAAC GGCAAGGGGA TAGAGGCAAA
AATGGCAGAC CAGAAGCCCC CAGCCTTATC TACACTTTGA ACCAGCTTCA ACAAAGAGAT
ATGCTGCCAG CGATTTATTT CATCTTCAGC CGTCGGGGAT GTGATAAAGC CGTAGCGGAA
GTGGGGGATT TATGGCTAGT TAATAACGAA GAATCCCAGA TACTACGACG ACAAATAGAT
GATTTTTTAG CTCGTAACCC CGAAGCCGGT CGTTCTGGAC AAATAGCCCC CCTTTATCGA
GGTGTTGCGG CTCACCATGC CGGGATTTTA CCAGCTTGGA AAGTTTTGGT AGAAGAACTA
TTTCAACAAG GGCTGATTAA AGTCGTATTT GCCACAGAAA CCTTGGCAGC CGGTATTAAT
ATGCCTGCCC GGACAACGGT TATTTCCACC CTATCCAAAC GCACCGACAC CGGACACCGC
CTCTTAAACG CATCGGAATT CTTACAAATG GCGGGTAGGG CTGGCCGTCG GGGGATGGAT
AAGCAAGGTC ATGTGGTGAC GGTGCAGACT CCTTTTGAAG GCTCAAAAGA AGCGGCCTAT
TTAGCTACAT CCAAACCAGA CCCCCTAGTC AGTCAATTTA CCCCTAGCTA TGGTATGGTT
TTGAACTTAC TGCAAACCCA CACCATAGAT GAAGCCAAGG AACTGATCGA ACGCAGTTTT
GGACAGTACA TGGCGACTTT GCATTTAAGA CCAGATTACG AAGAAATTGC GGCTTTAGAG
GGGGAATTAG CCAAACTACA AGAGCAAATC AACGCCGTTG ACGAAAGTGA CATCCTTATC
TATGAAAAAT TACGGCAACG GTTGAAAGTA GAACGTCAGC TATTAAAGAC TCTACAAGAA
CAAGCCCAGG AGGAGCGACA AGAACAAATT AAAATGCTCT TGGATTTTGC CATTTCGGGA
ACCCTGTTGA GTCTGAAGGG TAAAAACATT ACAGCGTCTA CACCCATAAC AGCCGTCTTA
GTTGGTAAAA CCTCAGGTTC TACTCAATCT GCTTGCTTAG TCTGCTTGGG ACAAGATAAC
CGATGGTATG TTGCCTCTAC TGCGGATGTG GTTGATTTAT ATGCTGAATT ACCACGGGTA
GATGTGCCGC CAGATATCCT ACCACCACCA GAATTGATAC TCAAACCAGG GCAATCCAGT
CGTGGTGCAA AGGAAACAAT GGCGATCGCT CAAAGTATCC CCGATCCTCA ACAATCTCTG
CATCTCTCCC CAGAGGTAGC CGAACAACTC AGCCGCACCG CCGCTATCCA AGCTCAATTA
GAAGCCAATC CCCTGCATCA ATCGGGTAAT GTGTCCACGG TTTTCAAAGC CCGCGCCCGC
TATGTGGAAC TGGAAGCCGA ACTCGAAGAA ATACAGGCGC AAGTAGAACA GCAATCTCAG
CGCTATTGGG AAGAATTTCT CAATTTAATT ACCATCTTGC AGCAATTCGA CTGCTTGGAT
AATCTAGTCC CCACCGCACT GGGTCAAATC GCTGCTGCTA TTCGTGGGGA AAATGAACTG
TGGTTAGGTC TAGCTTTAGC TAGTGGGGAG TTAAATAACT TAGACCCCCA CCATTTAGCA
GCCACTATCG CCGCTTTAGT TACAGAAACT CCCCGTCCAG ATAGCAGGGT TAACTTCAAC
CTTTCCCCAG AAATAGACGA CGCTTGGTCG AGATTACAAA AGACCCGTCG CGCTGTCTTA
AAGGTGCAGT ACCGACACGG TGTAGCCTTA CCTGTAGGTC TGGAAAATCG CTATATCGGC
TTAATTGCCC TTGTGGAACA GTGGGCTTTA GGAATCGAAT GGGTTGAACT TTGCCAAAAC
ACCACCTTAG ATGAAGGTGA TGTAGTGCGA ATTTTACGCC GTTCTTTGGA TTTATTATCC
CAAATACCCC ACGTTCCTAA TTTGCCTGAT GTTTTACAGC GTAATGCCTA CCGTGCCATG
CAACTGATTG ATCGATTCCC GGTGAATGAA GTTGTGGAAT AG
 
Protein sequence
MNYPAPSPEL DLGLIFPFDL DQFQKDAIAS LNAGRSVVVC APTGSGKTLV GEYAIYRALA 
RGKRVFYTTP LKALSNQKLR DFREKFGFEQ VGLLTGDASI NRDAPILVMT TEIFRNMLYG
TPIGQVGISL VDVEAVVLDE CHYMNDRQRG TVWEESIIYC PRGVQLVALS ATVANSDQLT
DWLSRVHGPT DLIYSDFRPV PLEFHYCNPK GLFPLLNDSK TKINPRLANR GKKRQGDRGK
NGRPEAPSLI YTLNQLQQRD MLPAIYFIFS RRGCDKAVAE VGDLWLVNNE ESQILRRQID
DFLARNPEAG RSGQIAPLYR GVAAHHAGIL PAWKVLVEEL FQQGLIKVVF ATETLAAGIN
MPARTTVIST LSKRTDTGHR LLNASEFLQM AGRAGRRGMD KQGHVVTVQT PFEGSKEAAY
LATSKPDPLV SQFTPSYGMV LNLLQTHTID EAKELIERSF GQYMATLHLR PDYEEIAALE
GELAKLQEQI NAVDESDILI YEKLRQRLKV ERQLLKTLQE QAQEERQEQI KMLLDFAISG
TLLSLKGKNI TASTPITAVL VGKTSGSTQS ACLVCLGQDN RWYVASTADV VDLYAELPRV
DVPPDILPPP ELILKPGQSS RGAKETMAIA QSIPDPQQSL HLSPEVAEQL SRTAAIQAQL
EANPLHQSGN VSTVFKARAR YVELEAELEE IQAQVEQQSQ RYWEEFLNLI TILQQFDCLD
NLVPTALGQI AAAIRGENEL WLGLALASGE LNNLDPHHLA ATIAALVTET PRPDSRVNFN
LSPEIDDAWS RLQKTRRAVL KVQYRHGVAL PVGLENRYIG LIALVEQWAL GIEWVELCQN
TTLDEGDVVR ILRRSLDLLS QIPHVPNLPD VLQRNAYRAM QLIDRFPVNE VVE