| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ava_2888 |
|---|
| Symbol | |
|---|
| ID | 3681452 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Anabaena variabilis ATCC 29413 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007413 |
|---|
| Strand | - |
|---|
| Start bp | 3588073 |
|---|
| End bp | 3588846 |
|---|
| Gene Length | 774 bp |
|---|
| Protein Length | 257 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 637718233 |
|---|
| Product | Short-chain dehydrogenase/reductase SDR |
|---|
| Protein accession | YP_323394 |
|---|
| Protein GI | 75909098 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG4221] Short-chain alcohol dehydrogenase of unknown specificity |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 47 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 7 |
|---|
| Fosmid unclonability p-value | 0.0119499 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATTTCCC TAAAGAATCA AATTGTTTTG ATTACTGGCG CAAGTAGTGG GATTGGTAAT
GCTTGCGCTA GGATTTTTGC TGGTGCGGGT GCAAAACTTA TCTTGGCGGC GCGAAGGCTG
GAAAGGTTGC AGCAGTTAGC TGATGAACTA AATCAAGATT TTGGTGTAGA GACTCACTTA
TTACAGTTAG ATGTGCGCGA TCGCTCTCAT GTTGAATCTG CTATCACTAG TTTACCTCCT
GCTTGGTCGG CAATTGATAT TCTGATTAAT AACGCTGGTC TCAGTCGCGG TTTAGATAAG
CTTTATGAAG GCGACTTTCA AGACTGGGAA GAGATGATTG ATACCAACAT CAAAGGTCTG
CTTTATCTAA CCCGTTATGT GGTTCCAGGG ATGGTAAATC GTGGCCGTGG TCATGTCATC
AACCTTGGTT CTATCGCCGG ACATCAAACC TATCCTGGTG GTAATGTTTA CTGTGGAACA
AAAGCTGCCG TCAAGGCAAT TTCCGAGGGC TTAAAACAAG ATTTGTTAGG TACTCCAGTA
CGAGTGACTT CTGTTGACCC TGGTATGGTG GAAACAGAAT TTAGTGAAGT CCGCTTTCAT
GGTGATACAG AACGGGCGAA AAAAGTTTAC CAAGGAGTCA ACCCACTGAC ACCAGAGGAC
GTTGCTGATG TCATCTTTTT TTGCGCCACG CGATCGCCTC ATGTCAATAT TAACGAAGTC
ATCCTCATGC CTGTTGACCA AGCCAGCGCC ACATTAGTTA ATCGCAAAAC ATAA
|
|---|
| Protein sequence | MISLKNQIVL ITGASSGIGN ACARIFAGAG AKLILAARRL ERLQQLADEL NQDFGVETHL
LQLDVRDRSH VESAITSLPP AWSAIDILIN NAGLSRGLDK LYEGDFQDWE EMIDTNIKGL
LYLTRYVVPG MVNRGRGHVI NLGSIAGHQT YPGGNVYCGT KAAVKAISEG LKQDLLGTPV
RVTSVDPGMV ETEFSEVRFH GDTERAKKVY QGVNPLTPED VADVIFFCAT RSPHVNINEV
ILMPVDQASA TLVNRKT
|
|---|
| |