| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ava_2861 |
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| Symbol | |
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| ID | 3681464 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Anabaena variabilis ATCC 29413 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007413 |
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| Strand | + |
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| Start bp | 3553608 |
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| End bp | 3555077 |
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| Gene Length | 1470 bp |
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| Protein Length | 489 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 637718208 |
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| Product | secretion protein HlyD |
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| Protein accession | YP_323369 |
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| Protein GI | 75909073 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1566] Multidrug resistance efflux pump |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.515359 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTGCGT ACATAGAAGT TCCGATGATT GGTAAAGTTA AATACCCGGC GCGCTGGCTG
GTGGGACTAG CAGCTGTTGG TGTTTTAGTA GTTGGCTCGG CCACAACCTA CAAGATAGTT
CAACAGGGAA ATAGTAAGCA AGATGTAACG CAATTAACGG TTCCGGTAGA AGCTAAGAAT
GTCACTATCA GAATTACCGC CAGTGGTAAA GTTGTGCCGG TGCAGAGTGT GAATCTTAGC
CCGAAAAACC CTGGTGTGCT GGCGCAGTTA TATGTAGAAC AAGGCGATCG CGTGGAGCAA
GGACAGATCA TTGCCCGGAT GGATGTGGGT GAGATCGAAG CTCAAATTGC TCAATATCGC
GCCAATATAG CCCAAGCCCA AGCCCAGTTA GATGAAGCTA GGGCGGGGAA TCGTCCTCAA
GAAATTGCTC AATCTAAAGC GCGTCTAGCC CAGGCTCAAG CTCAATTAGC TGAGTCTGTG
GCCGGGAATC GTCCCCAAGA AGTTGCTAAA GCCCAATCTC AAGTTGATGC AGCCCAGGCC
AGGGTAAATT ACACATCGGA ACAGGTAAAA CGTTATCAAT ATCTCTTTAA CCAAGGGGCA
GAGAGAAAAC AATTATTTGA TCAAGCCGTT AGTGAAGACA AAAGTGCGAG AGCTAATTTA
GCAGAAGCAC AAAAGCAATT ATCCTTATTG CAAAGTGGCA CTCGGAGTGA GGTGATCTCT
GCAAAGGAAG CTGCTGTCAC CGAAGCACGG GCAGCATTAG TACTTTCACA AGAAGGTAGC
CGCCCCGAAG AAATTGCCCA ACGTCAAGCA GCTGTGAAAG CAGCCCAAGC ACAGCTAGCA
GCCGCCCAAG TTAGATTAGC AGATACGATT ATTCGCGCGC CTTTCTCTGG CATAGTCACT
CAGAAGTACT CCAACGTGGG TGCTTTCGTC ACTCCTACAA CCTCCGCTTC CACCAGTGCT
TCTGCAACTT CTAGTTCCAT TGTGGCGTTA GCCAGGGGTG TAGAAATCTT GGCGCAAGTC
CCAGAAGCTG ACATTGGCCG CATTAAACAA GGGCAACAAG TAGAAATTGT GGCAGATGCC
TATCCTGATG AAGTTTTTCA AGGGCGTGTA CGTTTAATTG CCCCGGAAGC AGTCATAGAA
CAGGGTGTGA CATCCTTTCA AGTGCGGGTA GCCATCGATA CGGGAGTGGA TAAACTACGA
TCTGGCTTAA ATGTAGATTT AACTTTCTTG GGCGATCGCG TCAATAATGC TCTGGTATTA
CCGACAGTTT CCATTGTCAC AGAAAATGGC AAAACAGGTG TCTTAGTACC AGATGCCCAA
AATAAACCCC AGTTTCGAGA AGTCACCGTT GGCGCACAAA TCCAAGACCA AACTCAGGTT
TTATCTGGCT TGAAAACAGG CGATCGCGTG TTTGTTGACT TACCCCAAGA CTACAGAATC
CAACAGGCCA AAGAAAAGGC AAATCAATGA
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| Protein sequence | MTAYIEVPMI GKVKYPARWL VGLAAVGVLV VGSATTYKIV QQGNSKQDVT QLTVPVEAKN
VTIRITASGK VVPVQSVNLS PKNPGVLAQL YVEQGDRVEQ GQIIARMDVG EIEAQIAQYR
ANIAQAQAQL DEARAGNRPQ EIAQSKARLA QAQAQLAESV AGNRPQEVAK AQSQVDAAQA
RVNYTSEQVK RYQYLFNQGA ERKQLFDQAV SEDKSARANL AEAQKQLSLL QSGTRSEVIS
AKEAAVTEAR AALVLSQEGS RPEEIAQRQA AVKAAQAQLA AAQVRLADTI IRAPFSGIVT
QKYSNVGAFV TPTTSASTSA SATSSSIVAL ARGVEILAQV PEADIGRIKQ GQQVEIVADA
YPDEVFQGRV RLIAPEAVIE QGVTSFQVRV AIDTGVDKLR SGLNVDLTFL GDRVNNALVL
PTVSIVTENG KTGVLVPDAQ NKPQFREVTV GAQIQDQTQV LSGLKTGDRV FVDLPQDYRI
QQAKEKANQ
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