Gene Ava_2840 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_2840 
Symbol 
ID3681482 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp3518094 
End bp3520643 
Gene Length2550 bp 
Protein Length849 aa 
Translation table11 
GC content44% 
IMG OID637718187 
ProductTonB-dependent siderophore receptor 
Protein accessionYP_323348 
Protein GI75909052 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1629] Outer membrane receptor proteins, mostly Fe transport 
TIGRFAM ID[TIGR01783] TonB-dependent siderophore receptor 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value6.8938e-06 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.338102 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACCCG GAAAAATACT TTTTCTTCTC TTGCTCACAG GTTCTGTTTG GTCATTAATC 
AACCATCCTG CAAATAGTCA GGAAGCTCCA TCCCCAACAC CACTCAATAC ACAATCACCA
GTACCTAACG CTCAGGAATT GACGCAAGTA ACTGGTGTGA GAGTTGTTCC GACAGCTCAA
GGTCTAGAGG TGATATTAGA TAGTACAGCC GCCGAAAAAT TGCAGGTATC AACGCAAAAT
CAAGGCAATA GTTTGATTGC TGATATCACT AACGCTCAAC TCAATTTGTC TGGGGAAAAC
ACATTCAGCC AAAATAACCC AGTCACAGGC GTAACTACTG TGACTGTGGT TAATCAAAAT
GACAATACAA TCCGGGTGAC TGTGACTGGA GAGAAAAGCC TTCCCAAATT TGAGCTATTT
GATAGTGATA CAGGTTTAAT TTTGGCATTC ACCGCAACTG AAGTAGCTCA AGATTCCCCC
GCCGAAGCGG ATGAACCAAT TGAACTGGTG GTGACAGCAA CGCGTACCGA AACACCTATA
CAAAATGTCC CACGTTCCAT CACTGTTATT GACCGCGAAC AAATCGCCGC ACAAGCCAGC
ACTTCTCGTA ACCTCATAGA AATTCTGGGG AAAACAGTTC CTGGTTTAGC ACCACCAGCC
CAAGGCGCTA GTAATTTTGG TCTAACTCTC AGAGGAAGGA ATCCCCAGGT TTTGATTGAT
GGAGTTCCCC AATCGACAAC GAGAAATGCG TCGCGGGATT TGCGGACAAT TGACTCGGCG
GCGATTGAAC GAATTGAAGT AGTACGCGGC CCCAGCGCAA TTTATGGTGA TGGTGCAACA
GGGGGTGTGA TTAATATCAT CACCAGGCGA CCGACTGAAG AAAAATTAAC CTCCCGGACA
GAAGTTGGTG TGAGTGCAGC TTTAGGTAAT TTGTCAGGGG ACAGTTTTAG CACCAACCTA
CAGCATTTCA TCTCGGCGAA ACAAGATAAC TTTGATTTTA CCTTTAACTT TGCAGTAGCT
AAAACTGGTG GCTTCTTTGA TGCTCAAGGC GATCGCATTC CCTCTGATCC TAATGCCCAA
GGAGGCTTTT CTGATGCTTC GAGTATCAAC TTATTTGGTA AGTTTGGTGT TGATATAGAT
ACAAATCAAC GTCTCCAACT CACCTTTAAT CGCTTCGACG AAAAACAAGA TACAGATATC
GCTAGTGACC CCAGCGTCAA TACTATCCCA GGTAGACAAA AAGCTCGTGC TTTAGAAGGG
TTGAGTTTAG ATGAAAGGCC AGGGAATGAG AACACATTCA TCAACCTGCA ATACACCCAT
GACGACTTAT TCAATAGCAA ACTACAAGCC CAGTTATATT ACCGAGATTA CCTGACGCGC
TTTTTTCCCT TTGATGGGCG TAGCTTTGCT AGTTTGGGTA ACGAAATCTT TCAATCGCGG
GTGGAGTCAG AAAAGTATGG GGGACGCTTG CAGATAGAAA CACCTTTATT TAATCAAGGT
GCAGCCAAAC TACTTTGGGG TGTAGATTAT TCCCACGAAG ATACCTCTCA ACCTGTATCT
GTATTTGATC AAACTGCGTT TGTCGCCAGT GGGGGGTTAG CATTTCGGAA AACAGGCGAT
CGCTCCTGGA CTCCTCCTTT AGAATTAAGG AGTCTGGGAT TATTTGCTCA ATTGAATTGG
GAAATAAGCG ATCGCTTCGT CTTCAATGGT GGTGTACGCT ACGAAAACGC TGATGTGAGT
GTCAATGATT TCCGCACCCT AGCTAATCCC AACGTTACTA TTGGCGGCGG TGATTTGAAC
TTTAACGCCA CACTGTTCAA TTTGGGCGCA GTATACGCCC TCAATCCCCA ACTGAGTGTA
TTTGCTAACT ATGCTCAAGG TTTCTCCTTA TCAGATATTG GGTTAGCACT CCGCAACGCC
CCACCAGGCT TTTCTGTAGA ATCCCTCAAT CCCGAACCGC AAAAAGTAGA TAACTATGAA
ATTGGCATTC GTGGACAATG GGACACTATA CAAGCATCAC TTTCGGCTTT TTACAACGAG
TCTGACTTAG GTACAACTTT CACAGCACCA GGGACTGTCA TCCGCGCCCC AGAAAGAATC
TATGGTCTAG AAGCAGCCAT TGACGCACAA CCTAGTTCTA CATGGCAAGT TGGCGGGACA
TTTACTCTTA TTGGTGGGGA AATTGACAGC AATAATGATG GCGATTACGA ATCATTAGAT
GGGTTTAGGA TTCCCCCTTT GAAACTTACA GCCTATGTAG AGAATGAGAC CTTACCCGGT
TGGCGCAATC GTCTGCAAGC TTTGTACTCT GGTAATAGAG AAGTCTTTGG TAATAACAAT
ACGGCCTTTG GTAGGAGACC TGTAGAGAGT TATTTTACTG TAGACTACAT CAGTAGCATT
AAACTCGGCG CAGGAACATT ACAACTGGGA TTAGAAAACC TCTTTAATAG TCAATATTTC
CCTGTAGCTT CCCAATTGCA AGCCAATGAT AGCGCTTATG CTGCTGCTAG AGGTAGGACT
TTGAGTATTA AGTATTCTTT TGATTGGTAA
 
Protein sequence
MKPGKILFLL LLTGSVWSLI NHPANSQEAP SPTPLNTQSP VPNAQELTQV TGVRVVPTAQ 
GLEVILDSTA AEKLQVSTQN QGNSLIADIT NAQLNLSGEN TFSQNNPVTG VTTVTVVNQN
DNTIRVTVTG EKSLPKFELF DSDTGLILAF TATEVAQDSP AEADEPIELV VTATRTETPI
QNVPRSITVI DREQIAAQAS TSRNLIEILG KTVPGLAPPA QGASNFGLTL RGRNPQVLID
GVPQSTTRNA SRDLRTIDSA AIERIEVVRG PSAIYGDGAT GGVINIITRR PTEEKLTSRT
EVGVSAALGN LSGDSFSTNL QHFISAKQDN FDFTFNFAVA KTGGFFDAQG DRIPSDPNAQ
GGFSDASSIN LFGKFGVDID TNQRLQLTFN RFDEKQDTDI ASDPSVNTIP GRQKARALEG
LSLDERPGNE NTFINLQYTH DDLFNSKLQA QLYYRDYLTR FFPFDGRSFA SLGNEIFQSR
VESEKYGGRL QIETPLFNQG AAKLLWGVDY SHEDTSQPVS VFDQTAFVAS GGLAFRKTGD
RSWTPPLELR SLGLFAQLNW EISDRFVFNG GVRYENADVS VNDFRTLANP NVTIGGGDLN
FNATLFNLGA VYALNPQLSV FANYAQGFSL SDIGLALRNA PPGFSVESLN PEPQKVDNYE
IGIRGQWDTI QASLSAFYNE SDLGTTFTAP GTVIRAPERI YGLEAAIDAQ PSSTWQVGGT
FTLIGGEIDS NNDGDYESLD GFRIPPLKLT AYVENETLPG WRNRLQALYS GNREVFGNNN
TAFGRRPVES YFTVDYISSI KLGAGTLQLG LENLFNSQYF PVASQLQAND SAYAAARGRT
LSIKYSFDW