Gene Ava_2829 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_2829 
Symbol 
ID3681530 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp3502282 
End bp3503184 
Gene Length903 bp 
Protein Length300 aa 
Translation table11 
GC content46% 
IMG OID637718176 
Producttwin-arginine translocation pathway signal 
Protein accessionYP_323337 
Protein GI75909041 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0614] ABC-type Fe3+-hydroxamate transport system, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.582079 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.501847 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCAAAT TCACTAGACG CACCTTTTTA ACTGCGGCGA CTGCTTCCGC TTTGACGGCG 
GCTTGTAATC GTTCTCCTCG TCCCCAAGCT GCAAGTAAAA CTGCAACCAG AGTAGTCGCC
CTAGAATGGG TGTATGCAGA AAACCTTTTA GCTTTGGGAA TCCAGCCTGT AGGAGTTGCA
GATATCCAGG GTTATAAAAA ATATGTAAAT GTGCAACCAT CCCTAGATGA GAGTGTAGTT
GATGTAGGGA CACGCCAAGA ACCGAGTTTA GAAGCGATCG CCCAATTAAA ACCTGATTTA
ATTTTAGGTG TAGATTTAAG ACACCAGACT ATTTACGATA CCTTATCTGC GATCGCCCCC
ACCCTCATAT TTAACCCCTA TCCCTCGGCG GAAAACTCAA ATCAACTCGA TGAGATGCAG
CAAACATTCC GCAAAATTGC CGAAAGCGTC AACCGTCGGG ATGTAGGGGA GAAAGTGCTT
CAGCAAATGC AAACCCAATT TCAAACAGTA GCCACCCGCA TCAAAAATAC TCAAAAACCT
GATTTCGTCC TCGGACAATT CAGCGACAAC GCCCCCCAAA TCCGCCTGTT TACCGATAAC
TCAATGGCTG CACAAATCCT CACAGCAATC GGTTTAAAAA ACGCCTGGAA AGGAGAATTC
GACCGTTTTG GCTTTAATAC AGTGTGGGTA GAAGCACTCC CAAAAGTCGA AACCGCCAAC
TTCATCTATA TTTCCGCCCC CAATAGCCCC TACAAACAAC AACTAGAAAC TAACCCCGTC
TGGCAAAAAC TACAATTCGT CCAGCAAAAA AGATTGTATG CGATCGCCCC AGATACCTGG
CTATTCGGCG GCCCCCTATC AGCCCAAATC CTAGTAGATA AAATCATTAA AACCCTCACA
TAA
 
Protein sequence
MIKFTRRTFL TAATASALTA ACNRSPRPQA ASKTATRVVA LEWVYAENLL ALGIQPVGVA 
DIQGYKKYVN VQPSLDESVV DVGTRQEPSL EAIAQLKPDL ILGVDLRHQT IYDTLSAIAP
TLIFNPYPSA ENSNQLDEMQ QTFRKIAESV NRRDVGEKVL QQMQTQFQTV ATRIKNTQKP
DFVLGQFSDN APQIRLFTDN SMAAQILTAI GLKNAWKGEF DRFGFNTVWV EALPKVETAN
FIYISAPNSP YKQQLETNPV WQKLQFVQQK RLYAIAPDTW LFGGPLSAQI LVDKIIKTLT