Gene Ava_2749 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_2749 
Symbol 
ID3682014 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp3388571 
End bp3389560 
Gene Length990 bp 
Protein Length329 aa 
Translation table11 
GC content44% 
IMG OID637718095 
Productserine/threonine dehydratase 
Protein accessionYP_323257 
Protein GI75908961 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1171] Threonine dehydratase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.976068 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.188122 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCACAGC TTAACTCTGT AACCATAACT GATGTGCAAG CAGCACAGCA GCGTCTTGCT 
GGTATTGCCC ATCGCACACC TGTGTTAACT TCCACAACTG TCAACGATCG CACTCATAAT
CAAGTCTTTT TCAAGTGCGA AAATTTTCAA CGCACAGGTG CTTTTAAATT TAGGGGTGCT
TATAATGCCT TAGCACAGCT ATCACCAACA CAAAAACACA AAGGTGTGTT GACTTTTTCT
TCGGGGAATC ATGGACAAGC GATCGCCCTT GCAGGTAAGT TACTCAACAT CCCCACAACT
ATTGTCATGC CTGATGATGC ACCTGTCATC AAGCAAACAG CTACCAAAAG TTACGGTGCA
GAGGTAATTT TATATAATCG CCAAGAAACG AATCGGGAAG AATTGGCGCA AAATCTCGCA
AGCGATCGCG GTTTAACCCT AATTCCTCCA TACGATCATC CCCATGTGAT CGCTGGACAA
GGTACAGCCG CATTAGAACT GGTGCAAGAA ATTGGTGAAC TGGATTTGCT GTTAGTTTGT
TGTGGCGGTG GGGGATTAAT TTCCGGTTGT GCGATCGCCG CTAAAGCTCT TTTACCTAAT
TTGCGCGTAA TTGGTGTAGA ACCAACACTC GCTGATGATG CTACTCGTTC CTTTTACACC
AAAACCCTAC AAACCGTCAC AAATCCCCAT ACTATCGCTG ATGGTGCGCG GACTCCTAGC
CTGGGACAGA TGACATTTCC CCTAGTTTTA CAATACGTTG ATGATATGGT GACGGTATCA
GAGGAAGCAA TTATTCGCAC CATGTTTTTC CTCTGGGAAC GGCTGAAAAT AGTCGTTGAA
CCCACAGGCG TATTAGCCGC AGCCGCTTTA CTTGAAAATG TAGTCAAAGC ACAAGGAAAG
AGAATTGGTG TGATTATCAG TGGTGGAAAT GTAGATTTAA CCAAAGTTGC TAGTTATGTC
AACTTAGTCA CTGAATTTGG TAATGGGTGA
 
Protein sequence
MSQLNSVTIT DVQAAQQRLA GIAHRTPVLT STTVNDRTHN QVFFKCENFQ RTGAFKFRGA 
YNALAQLSPT QKHKGVLTFS SGNHGQAIAL AGKLLNIPTT IVMPDDAPVI KQTATKSYGA
EVILYNRQET NREELAQNLA SDRGLTLIPP YDHPHVIAGQ GTAALELVQE IGELDLLLVC
CGGGGLISGC AIAAKALLPN LRVIGVEPTL ADDATRSFYT KTLQTVTNPH TIADGARTPS
LGQMTFPLVL QYVDDMVTVS EEAIIRTMFF LWERLKIVVE PTGVLAAAAL LENVVKAQGK
RIGVIISGGN VDLTKVASYV NLVTEFGNG