Gene Ava_2724 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_2724 
Symbol 
ID3682085 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp3362268 
End bp3362993 
Gene Length726 bp 
Protein Length241 aa 
Translation table11 
GC content42% 
IMG OID637718069 
Productphospholipid/glycerol acyltransferase 
Protein accessionYP_323232 
Protein GI75908936 
COG category[I] Lipid transport and metabolism 
COG ID[COG0204] 1-acyl-sn-glycerol-3-phosphate acyltransferase 
TIGRFAM ID[TIGR00530] 1-acyl-sn-glycerol-3-phosphate acyltransferases 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.129474 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTGCAA ATAACCCCCT AGATATTTCT CGGATATTCT TAAACACACT CTCTACTAAA 
ATGTTTCGCT ATTACGAGGA TCGCATTCCC CAAGATGCTA GTTTGTTAAT AGTGAGCAAT
CACCGCAGTT TTATGGATGC ACTAACGTTA ATGGCGGCTT TATCGAATCC GATTCGTTTT
GCTTGTCATC ACTATATGGG ACAAGTGCCA ATATTGCGGG AGATTGTCAC AGGACAATTG
GGTTGCTTTC CTTTAGAAGA AAATCAACAT CGTCAGCAAA GCTTTTTTGT GCAGTCACAA
AAGCTACTAC AAACAAAACA AATGGTGGGA GTATTTCCTG AAGGTGCTGA TCCGATGGTG
AAATATACTC CAGCCAATGA AGTAGGGGAA TTTCGCAGGG GCTTTGCTCA TCTAGCGTTA
CGTTCTCAAG TCAAGAACTT AGCAGTGTTA CCAGTAGCGA TCGCTTCCTT AGAAGAGAGT
AACACTGCGG CTTTTCCCCT AAAATTATTG AGTTTGTTCG ATCCTTCCGA ACCATTATTC
AATCAATATG GCTGGCATCC CCTGGTAATC TATCATCGGG TGGCTGTCTT AGTCGGTCGT
CCTTATTGGA TTACAGCCCA ACATCACCAC CAATATCACG GCAAACAGGC GAAAAATGTT
GTGGCTGAAC TAACTACACA CTGCCATGAT GAAATCGCTA CTTTACTTGC TCAAGGTTGT
TATTAA
 
Protein sequence
MSANNPLDIS RIFLNTLSTK MFRYYEDRIP QDASLLIVSN HRSFMDALTL MAALSNPIRF 
ACHHYMGQVP ILREIVTGQL GCFPLEENQH RQQSFFVQSQ KLLQTKQMVG VFPEGADPMV
KYTPANEVGE FRRGFAHLAL RSQVKNLAVL PVAIASLEES NTAAFPLKLL SLFDPSEPLF
NQYGWHPLVI YHRVAVLVGR PYWITAQHHH QYHGKQAKNV VAELTTHCHD EIATLLAQGC
Y