Gene Ava_2716 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_2716 
Symbol 
ID3682214 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp3353353 
End bp3353961 
Gene Length609 bp 
Protein Length202 aa 
Translation table11 
GC content47% 
IMG OID637718061 
ProductNADH dehydrogenase subunit J 
Protein accessionYP_323224 
Protein GI75908928 
COG category[C] Energy production and conversion 
COG ID[COG0839] NADH:ubiquinone oxidoreductase subunit 6 (chain J) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.307115 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAATCTAG CGGAAGGAGT ACAGGTTGTT TCCTTTGGCA TACTAGCTAC GATGTTGATT 
GGAACCGCCC TTGGTGTGGT GCTAGCATCC AGCATCGTCT ATTCTGCCTT TTTACTGGGA
GGTGTATTCA TCAGTATTGC TGGAATGTAC CTGTTGCTAA ATGGTGATTT CGTCGCCGCC
GCCCAAGTGC TGGTTTATGT TGGGGCGGTA AACGTGTTGA TTTTGTTCGC TATTATGTTG
GTGAACAAGC GGCAGGATTT TATACCTTAT CCTAGCGCTG GCATACGGAA AATTTTGACG
GCGATCGTCA GCGTCGGATT ATTCGCGTTG TTAAGCACTA TGGTGTTAGC TACACCTTGG
GCTTACTCGA CCACTCCTAA AGTAGGAGAT GGTTCGATCA TTGTGATTGG GGAGCATTTC
TTTAGCGACT TCTTGCTACC TTTTGAACTG GCTTCTGTTT TGTTGTTAAT GGCGATGGTG
GGAGCAATTA TTTTGGCACG TCGTGAGTAC CTGCCTGAAG TAACACCATC TGACTTACCT
CAAACCGTGT TGACATTACC AGAACGCCCC AGAGAATTAG TAGGCGCTGG TAGCGAAACT
CAAGAGTAA
 
Protein sequence
MNLAEGVQVV SFGILATMLI GTALGVVLAS SIVYSAFLLG GVFISIAGMY LLLNGDFVAA 
AQVLVYVGAV NVLILFAIML VNKRQDFIPY PSAGIRKILT AIVSVGLFAL LSTMVLATPW
AYSTTPKVGD GSIIVIGEHF FSDFLLPFEL ASVLLLMAMV GAIILARREY LPEVTPSDLP
QTVLTLPERP RELVGAGSET QE