Gene Ava_2682 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_2682 
Symbol 
ID3682043 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp3317667 
End bp3318647 
Gene Length981 bp 
Protein Length326 aa 
Translation table11 
GC content43% 
IMG OID637718027 
ProductABC transporter-like 
Protein accessionYP_323190 
Protein GI75908894 
COG category[R] General function prediction only 
COG ID[COG4586] ABC-type uncharacterized transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.241225 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.53563 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCAATTA TTACTGTTGA AAATCTAAGT AAATCCTATC CAGTAGCGGT GAAAGAACCA 
GGAATTGGCG GTACAATCAC TCACCTTTTC CGCCGCACCT ACCGTTCAAT ACAAGCTGTT
CAGGATGTTT CTTTTGAAAT TGCACCTGGT GAAGTAGTGG GGTTTTTAGG GCCGAATGGT
GCTGGTAAAA CTACCACGCT GAAAATGCTG ACAGGGTTGA TACATCCTTC TCATGGTGTT
GTCAGGGTGG CTGGCCATGT TCCTTTTCTG CGCCAAGAAG CATTTTTACA AAAAATCACT
CTGGTAATGG GACAAAAGCA ACAACTTCTC TGGGATTTAC CAGCACTGGA TTCTTTGAGA
ATTAATGCTG CTGTCTATGA CATCTCGGAC AAGGAATTTC AGCGTCGGGT AGGGGAATTA
ACAGAGATGC TGTCCTTGGA AGGTAAGCTG ACTCAACCAG TGCGGAAACT TTCTTTGGGT
GAACGCATGA AAGCTGAACT TTTGGCAGCG CTGTTACACC GTCCTCATGT ATTGTTTTTG
GATGAGCCAA CATTGGGTTT AGATGTCAAC GCTCAAGTTG CGGTACGTGA TTTTTTACGC
GAGTACAATC AACGTTATCA AGCTACAGTG TTGTTAACTA GTCATTACAT GGCTGATATC
ACAGCTTTGT GTGAACGGGT GCTGTTGATT CATCAAGGAA AGCTCATGTA TGACGGTAGC
TTAGATGGAC TACTAGAAAG TTTTGCTCCT TACCGAGAAG TTCGTGTAGA GTTAGCCCAA
CCTTTACCTT TAGAAACACT CAAATCTTAT GGTGATGTGC AACTTTTAGA AGGGCGTGCG
GTATGCTTTA TAGTGCAGCA AGAGGTACTG ACGCGCACAG TATCGAAAAT ATTAACAGAG
TTAGAAGTTA TAGATTTAAC AGTAACGGAG CCACCTGTTG AGGAAGTGAT AGGGCGAGTT
TTCCAGGCAG GAGTTGTTTA A
 
Protein sequence
MSIITVENLS KSYPVAVKEP GIGGTITHLF RRTYRSIQAV QDVSFEIAPG EVVGFLGPNG 
AGKTTTLKML TGLIHPSHGV VRVAGHVPFL RQEAFLQKIT LVMGQKQQLL WDLPALDSLR
INAAVYDISD KEFQRRVGEL TEMLSLEGKL TQPVRKLSLG ERMKAELLAA LLHRPHVLFL
DEPTLGLDVN AQVAVRDFLR EYNQRYQATV LLTSHYMADI TALCERVLLI HQGKLMYDGS
LDGLLESFAP YREVRVELAQ PLPLETLKSY GDVQLLEGRA VCFIVQQEVL TRTVSKILTE
LEVIDLTVTE PPVEEVIGRV FQAGVV