Gene Ava_2680 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_2680 
Symbol 
ID3682041 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp3314651 
End bp3315715 
Gene Length1065 bp 
Protein Length354 aa 
Translation table11 
GC content44% 
IMG OID637718025 
Productmannose-1-phosphate guanylyltransferase (GDP) 
Protein accessionYP_323188 
Protein GI75908892 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0836] Mannose-1-phosphate guanylyltransferase 
TIGRFAM ID[TIGR01479] mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.406376 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.570909 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTAGCC CATTGTTCCC AGTAATCCTG GCTGGTGGTA AAGGCGAGCG TTTTTGGCCT 
CTCAGCCGCC AAGACCGACC CAAACAATTT TTAAGTCTTG ATGGTAGCTC CAGAAGTCTA
TTGCAATCAA CCGCCGAACG ACTGGTTAAG TTCGCAGGCG AGTGGAATGA TTTATGGGTA
ATCACCTCTA GTCAGTTAGG ACAAGGGGTG CAACAACAGC TACCCGAATT ACCATCGCAA
AATTTGTTGA CTGAGCCGCA GGGTAGAGAC ACTGCTGCTG CCGTTGCTTG GGCTAGTTTG
GAAATTCAAA AGCGTTATGG TGATGACGCG ATTATAGGCT TTTTTCCTTC TGATCACTGG
ATAGCTGATC CAGAGGCGTT TAAACGCACT TTAGATGCTG CTAGCCAATT AGCGACAAGC
ACAGAGGCAA TTGTCACTTT GGGGATCAAG CCGACTTTCC CATCAACTGG TTACGGCTAC
ATTGAACAAG GTGAAAAAAT TGGTACCTTT AATGAGTTGC CAGCTTATCA TGTCAATCGC
TTTACTGAAA AGCCTATCCG GGAAAAAGCC GAAACTTTTC TATCTACGGG ACGATATAGC
TGGAATAGCG GTATGTTTGT TTTCCGAGCC GGAGTTGTTC TCAAGGAACT CTATACCTAT
GCGCCAGAAA TCATTGAACC ACTGGTAGAA CATGGGGTTG ATGTTTATCC CCAGTTACCT
AAGAAGAGTA TAGACTACGC ACTTATGGAA AAGACAAATC TAGTATATGT CTTACCAGCA
GAATTTGGGT GGGATGATTT AGGAGATTGG AATGCAATTG AGCGTTTACT CAAAAAACCG
GATGATCCCA ATGTAGAACT GGCTACTCAT GTAGGTCTAG ATACTCAGGG GGCGATTGTT
TATGCTACTA ATCCAGAGGA TGTAATTGTT ACTATTGGTT TAGAGGATGT AGTGATTGTG
CGCGATCGCA ATGTTACTCT CATAGTCAAT AAGGAACGTA CCCAGGAAAT CAAGCAAATT
ATCAAAACCC TCCAAGGTGA TCCCCGATTT ACTGACCTGC TCTAA
 
Protein sequence
MSSPLFPVIL AGGKGERFWP LSRQDRPKQF LSLDGSSRSL LQSTAERLVK FAGEWNDLWV 
ITSSQLGQGV QQQLPELPSQ NLLTEPQGRD TAAAVAWASL EIQKRYGDDA IIGFFPSDHW
IADPEAFKRT LDAASQLATS TEAIVTLGIK PTFPSTGYGY IEQGEKIGTF NELPAYHVNR
FTEKPIREKA ETFLSTGRYS WNSGMFVFRA GVVLKELYTY APEIIEPLVE HGVDVYPQLP
KKSIDYALME KTNLVYVLPA EFGWDDLGDW NAIERLLKKP DDPNVELATH VGLDTQGAIV
YATNPEDVIV TIGLEDVVIV RDRNVTLIVN KERTQEIKQI IKTLQGDPRF TDLL