Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ava_2672 |
Symbol | |
ID | 3682033 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anabaena variabilis ATCC 29413 |
Kingdom | Bacteria |
Replicon accession | NC_007413 |
Strand | - |
Start bp | 3301420 |
End bp | 3302961 |
Gene Length | 1542 bp |
Protein Length | 513 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 637718017 |
Product | amine oxidase |
Protein accession | YP_323180 |
Protein GI | 75908884 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG1233] Phytoene dehydrogenase and related proteins |
TIGRFAM ID | [TIGR02730] carotene isomerase [TIGR02734] phytoene desaturase |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACTTTT CACTTCCTAC TCCCCAATCT CCACTAGATA TCATCGTTAT CGGTAGCGGT ATCGGTGGTT TATGTGCGGC TGGGTTGTTG GCACGTTATG GTAAACGAGT GATTGTGTGC GAAAGTCATA CAATTCCCGG TGGTGCAGCC CATAGCTTTA AACGGCGCGG ATTTGAGTTT GATTCTGGCC CCTCCTTTTA TTGTGGTTTG ACGGATGTCC AGAGTTTGAA TCCTATCAAA CAGGTTCTTG ATGCCTTGGG TGAATCTCTC CCAGTTGTAC CGTATGATCC TTTAGGAAAA TACCATTTTC CTGAGGGAAC TGTTGCAGTG TACAGCAACA CCGAAAGATA CCTTCATGAA GTAGAGAAAA TCACTCCCCA AGGTGCAAAC GAACTACAGC AATTCACAAA ACGCTTATTA GGTTTATACG ATGCCATGAA AGGCATTCCC ACCTTAGCAT TGCGTTCAGA TTGGCAGGTA ATTTTGATTT TACTGCAACA TTACCTAATG TCTTTGGGGC AAATGTTACC TTACTTACCC TTGGTTCAGT CTTCTGTAGG GGATGTGATG GATAGGACTG TTAACGACCC TTGGGTAAGA CGACTAATTG ATTTAGAGTG TTTTCTGCTT TCTGGTTTAA AGGCACACGG CACAATTGCC CCAGAGGTGG CTTTTATGTT GGGTGAACGT TCCCGTGTGG GAGTTGAGTA TCCAATAGGG GGTAGTGCCA CAATTGTCAA TGCCTTGGTG CGGGGTTTGG AACGTTGGGG CGGTCAGTTA CGCTTGGGAT GTCATGTTGA GCAGATTTTG CTGGAAGCTG GCAAAGTTGT AGGTGTGAAG TTACGAAATG GTGAAATTCT CAACGCGCCT ATTGTGATTT CTAATGCGAC AATTTGGGAC ACCTACAATC ACTTGTTACG TCCTGAAGAT TTACCCACTG CCTATCGGCA AGAGGCGTTA CAGACACTGG CTGTAAAAAG TTTTATGCAC CTGCATCTAG GTATCAGAGC AGATGGGTTA GAAAATTTAA CAGGACATCA CGTAGTAGTC AATGATTCTG GTGTAGATAT TACTACCCCA GGCAATACTT GTATGATATC GATTCCCAGT GTGTGGGATG CGGCTCTTGC TCCAGAGGGA CATCATGTAG TTCATGCCTA TACCCTAGAA TCCTACACTG GATGGGAACG CAATGATGGG TATGCAGTGA AGAAAAGGGA AAAAGCCGAG TCTTTATACC GTGCTTTAGA ACGCATCATT CCCGATATTA GAGAGCGTGT AGTCTTGGAA CTCATCGGTA CACCCTTGAC TCATGCTCAT TATCTACGTC GCTATCAAGG AACCTACGGC CCTGCCATTG CGGCTGGTCA GGGAATGTTT CCGAGTACAC ATACACCCAT TCAGGGTTTG TATCGCGTTG GTGATAGCAC TACCCCAGGC ATTGGTGTCC CGGCGGTAGC CGCTTCTGGT ATTTTATGTG CAAATACCTT GGTAGAGCGA TCGCAAACAA CAGACTTATT AGATATTCTC CAGAAGAAAT AA
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Protein sequence | MNFSLPTPQS PLDIIVIGSG IGGLCAAGLL ARYGKRVIVC ESHTIPGGAA HSFKRRGFEF DSGPSFYCGL TDVQSLNPIK QVLDALGESL PVVPYDPLGK YHFPEGTVAV YSNTERYLHE VEKITPQGAN ELQQFTKRLL GLYDAMKGIP TLALRSDWQV ILILLQHYLM SLGQMLPYLP LVQSSVGDVM DRTVNDPWVR RLIDLECFLL SGLKAHGTIA PEVAFMLGER SRVGVEYPIG GSATIVNALV RGLERWGGQL RLGCHVEQIL LEAGKVVGVK LRNGEILNAP IVISNATIWD TYNHLLRPED LPTAYRQEAL QTLAVKSFMH LHLGIRADGL ENLTGHHVVV NDSGVDITTP GNTCMISIPS VWDAALAPEG HHVVHAYTLE SYTGWERNDG YAVKKREKAE SLYRALERII PDIRERVVLE LIGTPLTHAH YLRRYQGTYG PAIAAGQGMF PSTHTPIQGL YRVGDSTTPG IGVPAVAASG ILCANTLVER SQTTDLLDIL QKK
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