Gene Ava_2672 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_2672 
Symbol 
ID3682033 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp3301420 
End bp3302961 
Gene Length1542 bp 
Protein Length513 aa 
Translation table11 
GC content46% 
IMG OID637718017 
Productamine oxidase 
Protein accessionYP_323180 
Protein GI75908884 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG1233] Phytoene dehydrogenase and related proteins 
TIGRFAM ID[TIGR02730] carotene isomerase
[TIGR02734] phytoene desaturase 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACTTTT CACTTCCTAC TCCCCAATCT CCACTAGATA TCATCGTTAT CGGTAGCGGT 
ATCGGTGGTT TATGTGCGGC TGGGTTGTTG GCACGTTATG GTAAACGAGT GATTGTGTGC
GAAAGTCATA CAATTCCCGG TGGTGCAGCC CATAGCTTTA AACGGCGCGG ATTTGAGTTT
GATTCTGGCC CCTCCTTTTA TTGTGGTTTG ACGGATGTCC AGAGTTTGAA TCCTATCAAA
CAGGTTCTTG ATGCCTTGGG TGAATCTCTC CCAGTTGTAC CGTATGATCC TTTAGGAAAA
TACCATTTTC CTGAGGGAAC TGTTGCAGTG TACAGCAACA CCGAAAGATA CCTTCATGAA
GTAGAGAAAA TCACTCCCCA AGGTGCAAAC GAACTACAGC AATTCACAAA ACGCTTATTA
GGTTTATACG ATGCCATGAA AGGCATTCCC ACCTTAGCAT TGCGTTCAGA TTGGCAGGTA
ATTTTGATTT TACTGCAACA TTACCTAATG TCTTTGGGGC AAATGTTACC TTACTTACCC
TTGGTTCAGT CTTCTGTAGG GGATGTGATG GATAGGACTG TTAACGACCC TTGGGTAAGA
CGACTAATTG ATTTAGAGTG TTTTCTGCTT TCTGGTTTAA AGGCACACGG CACAATTGCC
CCAGAGGTGG CTTTTATGTT GGGTGAACGT TCCCGTGTGG GAGTTGAGTA TCCAATAGGG
GGTAGTGCCA CAATTGTCAA TGCCTTGGTG CGGGGTTTGG AACGTTGGGG CGGTCAGTTA
CGCTTGGGAT GTCATGTTGA GCAGATTTTG CTGGAAGCTG GCAAAGTTGT AGGTGTGAAG
TTACGAAATG GTGAAATTCT CAACGCGCCT ATTGTGATTT CTAATGCGAC AATTTGGGAC
ACCTACAATC ACTTGTTACG TCCTGAAGAT TTACCCACTG CCTATCGGCA AGAGGCGTTA
CAGACACTGG CTGTAAAAAG TTTTATGCAC CTGCATCTAG GTATCAGAGC AGATGGGTTA
GAAAATTTAA CAGGACATCA CGTAGTAGTC AATGATTCTG GTGTAGATAT TACTACCCCA
GGCAATACTT GTATGATATC GATTCCCAGT GTGTGGGATG CGGCTCTTGC TCCAGAGGGA
CATCATGTAG TTCATGCCTA TACCCTAGAA TCCTACACTG GATGGGAACG CAATGATGGG
TATGCAGTGA AGAAAAGGGA AAAAGCCGAG TCTTTATACC GTGCTTTAGA ACGCATCATT
CCCGATATTA GAGAGCGTGT AGTCTTGGAA CTCATCGGTA CACCCTTGAC TCATGCTCAT
TATCTACGTC GCTATCAAGG AACCTACGGC CCTGCCATTG CGGCTGGTCA GGGAATGTTT
CCGAGTACAC ATACACCCAT TCAGGGTTTG TATCGCGTTG GTGATAGCAC TACCCCAGGC
ATTGGTGTCC CGGCGGTAGC CGCTTCTGGT ATTTTATGTG CAAATACCTT GGTAGAGCGA
TCGCAAACAA CAGACTTATT AGATATTCTC CAGAAGAAAT AA
 
Protein sequence
MNFSLPTPQS PLDIIVIGSG IGGLCAAGLL ARYGKRVIVC ESHTIPGGAA HSFKRRGFEF 
DSGPSFYCGL TDVQSLNPIK QVLDALGESL PVVPYDPLGK YHFPEGTVAV YSNTERYLHE
VEKITPQGAN ELQQFTKRLL GLYDAMKGIP TLALRSDWQV ILILLQHYLM SLGQMLPYLP
LVQSSVGDVM DRTVNDPWVR RLIDLECFLL SGLKAHGTIA PEVAFMLGER SRVGVEYPIG
GSATIVNALV RGLERWGGQL RLGCHVEQIL LEAGKVVGVK LRNGEILNAP IVISNATIWD
TYNHLLRPED LPTAYRQEAL QTLAVKSFMH LHLGIRADGL ENLTGHHVVV NDSGVDITTP
GNTCMISIPS VWDAALAPEG HHVVHAYTLE SYTGWERNDG YAVKKREKAE SLYRALERII
PDIRERVVLE LIGTPLTHAH YLRRYQGTYG PAIAAGQGMF PSTHTPIQGL YRVGDSTTPG
IGVPAVAASG ILCANTLVER SQTTDLLDIL QKK