Gene Ava_2657 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_2657 
Symbol 
ID3681959 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp3286940 
End bp3288583 
Gene Length1644 bp 
Protein Length547 aa 
Translation table11 
GC content38% 
IMG OID637718002 
Producthypothetical protein 
Protein accessionYP_323165 
Protein GI75908869 
COG category[S] Function unknown 
COG ID[COG5305] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGGGATC TCAAACTTAC TCCGCGTTGG TTGAGGTTAT TTTTACTAAT ACTATTGGTA 
ACAGGTGTAT TTTTCCGCTT TTTTCATCTC GACTACAAAA TTTACTGGCA CGATGAAGCC
TATACATCTA TACGGGCGGC GGGCTTCACA CGCCAAGAAA TAGACCAAGA AATTTTTCAA
AATCACATCA TACCAGCACC ATATTTACTG AAGTTTCAGC GATTGAAACC AGGAAGCACT
GTAGTAGATA CAATTAACTC ACTAAAAATT GAAGACCCGC ATCATCCACC ACTTTATTTC
TTAATGGCTC GCTTTTGGAT GCAGATGTTT GGCAGTTCTC TCACTGCGTC CCGGACCTTG
CCCGCTTTAC TGAGTTTGTT GGCGTTGCCA TTAATGTATG CTTTGGGGCT GGAGTTATTT
GCTTCTACAA CAGTGGCTTT GTTTGCAACA GTGCTTTTAG CTTTGTCTCC TTTTGATATT
CTGTTTGCTC AAACAGCCAG ACAGTACAGC TTACTAACAG TAGCAGTCAT TGGGAGCAAT
TTTTTATTAT TACGGGCTTG GCGCTTATCT ACCTGGCAAA ATTGGAGTTT GTATACTCTC
AGCAACATTA TAGGCTGGTA CACCCATCCT TTTTTTGTTC TAACGGTAGT TGCTCAAGGA
ACTTATATAT TTTTAGGGCG GACATTTCAG CAAGAAAATA GGCAATCAAC TAGAAAGAAT
GTCATATATT TCTTAGTGGC GATCGCTAGC TCGCTTATTT TATATCTTCC TTGGTTAGTA
GTACTAGTCA CTAACCGCCA ACGGGCATTA GAAACCACAA GTTGGACTGG AGATACAGTT
GACATATGGT ATTTATTAAA ACTATGGCTG GTTAGTTTTA GTTCTTTATT TTTTGACTTA
GACTTTGGTT TTGACACTAT CTGGAACGGT ATCCGTTCTT CTCTATTGAA ACTAGCCGTT
ATTATGTTAA TAGCTGGGGC AACTTATTTA GTGTGTCACC AAACTAAAAG AGCAACCTGG
TTATTTATTA TTACTACAAT TCTCGTTCCT TTTCTCAGTT TAGCTTTGCC AGATTTACTA
CTAGGGGGTA GGCGCTCTAC TGTCAGCCGT TACTTGATAT CTTCTTATCC TGGTGTGCAA
CTTGCAGTTG CTTATTTATT AGGAACTAAA ATTATTTCCC AACGCTGGTT ATGGCAAGGT
GTGACTCTAC TTATTTTCAC AGGCAGTATC GCATCAGCTA CTGTTAGTGC TTCTGCACAC
ACTTGGTGGA GCAAGGATTT AAGCTATCAT AATTTTGAAA TAATTAATCG GATTAACGGT
AGTTCCTCAC CAGTGATAGT CAGTGATATT GGAGATGAAT ACACTAACAC TGGCGATCTA
ATTGCCCAGA GTTATTCACT TCAAGATCAT GTAAGATTAC TGCTTTTAAC TCAGCCTACT
AATTTGGAGA ATGCTAATTT AAATCTTTTC CTTTCCCAAA ATAATCAATT GTTGACATTT
CGTCCGTCAC AGCAAATATT AGGAGCTTTA AAACAAAATA AAAAACAGGT GCTTCCAGTG
TTTGAGCCTG GAAGACTTTG GCAAATAAAA AATACCCTAA CTCAAGAAGT TAATTCAAAA
TCAACAAATA TTCGGAGTAA ATAA
 
Protein sequence
MRDLKLTPRW LRLFLLILLV TGVFFRFFHL DYKIYWHDEA YTSIRAAGFT RQEIDQEIFQ 
NHIIPAPYLL KFQRLKPGST VVDTINSLKI EDPHHPPLYF LMARFWMQMF GSSLTASRTL
PALLSLLALP LMYALGLELF ASTTVALFAT VLLALSPFDI LFAQTARQYS LLTVAVIGSN
FLLLRAWRLS TWQNWSLYTL SNIIGWYTHP FFVLTVVAQG TYIFLGRTFQ QENRQSTRKN
VIYFLVAIAS SLILYLPWLV VLVTNRQRAL ETTSWTGDTV DIWYLLKLWL VSFSSLFFDL
DFGFDTIWNG IRSSLLKLAV IMLIAGATYL VCHQTKRATW LFIITTILVP FLSLALPDLL
LGGRRSTVSR YLISSYPGVQ LAVAYLLGTK IISQRWLWQG VTLLIFTGSI ASATVSASAH
TWWSKDLSYH NFEIINRING SSSPVIVSDI GDEYTNTGDL IAQSYSLQDH VRLLLLTQPT
NLENANLNLF LSQNNQLLTF RPSQQILGAL KQNKKQVLPV FEPGRLWQIK NTLTQEVNSK
STNIRSK