Gene Ava_2624 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_2624 
Symbol 
ID3681907 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp3246478 
End bp3247293 
Gene Length816 bp 
Protein Length271 aa 
Translation table11 
GC content42% 
IMG OID637717970 
Producthypothetical protein 
Protein accessionYP_323133 
Protein GI75908837 
COG category[S] Function unknown 
COG ID[COG2912] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value1.53014e-11 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATTTCT CCTCAGCACG ACAATATTTT TATCAAGAGA TTCAGCAATC TGAGGCGGAT 
ATTGACCTAG CTAGGGCAGC TTTGTATATT GCTAAGGAAG AATATCCTAG ACTGGATGTA
GAGGAATATC TAAGCGCACT CGATACAATG GCAATGGAAG TTGAGGAACG CTTGCCATCT
TCACGGTATC CGTTACGGGT GATTCAAGGT ATTAATCAGT ATTTGTATGA CGATTTAGGA
TTTATAGGGA ATCAGAAAGA TTATTACGAC CCACGCAATA GTTTCTTCAA TGAGGTAATT
GACCGTCGAG TGGGTATTCC GATTACTTTA GCTTTAGTTT ATCTGGAGAT TGCCCAAAGG
ATTGATTTTC CAATGGAGGG GGTGGGATTA CCGGGACATT TCCTCATCCG TCCAGCTATC
TCTGATATGG AGATTTTTGT GGATGCGTTT AATCGTGGTG AGGTGATGTT TGCCCAAGAT
TGCCAAGACA AGCTAAATCA AATGTTTAAG GAATCGGTGA ATTTGCGCCC GGAATTTTTG
GCTAGAGTTA GCAAGCGGCA GTTTTTGGCA AGGATGTTGA CGAACCTAAA ATATATTTAC
CTGAGACAGC AGCAATTAGA AAAAAGCTTA GGTGTCGTTG AGAGAATTTT ATTATTGTTT
CCTGAGGCAA CTTCAGAATT GCGCGATCGC GGTTTACTCT ACTACCAACT AGGTTACTAT
CCTCAAGCTA CCAATGACCT AGAAACCTAC CTAGCAAATG TTCCCAACGC CGAAGATGCG
GTAACTATCA AGCGGTTATT GGGAGAGATG AAGTGA
 
Protein sequence
MNFSSARQYF YQEIQQSEAD IDLARAALYI AKEEYPRLDV EEYLSALDTM AMEVEERLPS 
SRYPLRVIQG INQYLYDDLG FIGNQKDYYD PRNSFFNEVI DRRVGIPITL ALVYLEIAQR
IDFPMEGVGL PGHFLIRPAI SDMEIFVDAF NRGEVMFAQD CQDKLNQMFK ESVNLRPEFL
ARVSKRQFLA RMLTNLKYIY LRQQQLEKSL GVVERILLLF PEATSELRDR GLLYYQLGYY
PQATNDLETY LANVPNAEDA VTIKRLLGEM K