| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ava_2559 |
|---|
| Symbol | |
|---|
| ID | 3679464 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Anabaena variabilis ATCC 29413 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007413 |
|---|
| Strand | - |
|---|
| Start bp | 3160578 |
|---|
| End bp | 3161360 |
|---|
| Gene Length | 783 bp |
|---|
| Protein Length | 260 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 637717905 |
|---|
| Product | exodeoxyribonuclease III |
|---|
| Protein accession | YP_323069 |
|---|
| Protein GI | 75908773 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0708] Exonuclease III |
|---|
| TIGRFAM ID | [TIGR00195] exodeoxyribonuclease III
[TIGR00633] exodeoxyribonuclease III (xth) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 48 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAATCG CTACTTGGAA TGTTAACTCG ATTCGCACTC GTCTAGAGCA AGTTGTGGAT
TGGTTAAAAC AAAATCCCGT TGATGTTCTG TGTTTGCAAG AGACAAAGGT TATAGATCAT
GATTTTCCAC GATCGCCTTT TGAAAATTTG GGCTATCACT CATATATATC AGGACAGAAA
GCTTACAATG GCGTAGCTTT AATTAGCCAG CAACAGCTTA CAGATGTGAC CACGGGATTC
ACACCGATTT TGCCAGATAT AGAACCAATA TGGGACGAGC AGAAACGAGT AATCACAGGT
GTGATCGATG GTGTCCGGAT TGTTAACCTT TATGTTCCCA ATGGTTCAGC GATCGCCAGC
GAAAAGTATG AGTATAAGCT ACGGTGGTTG ACTGTATTGA AAGAGTATCT GCGATCGCTT
CTGCTATTAC AGCCCTCCAT CTGCATCTGT GGTGACTTTA ATATTGCCTT AGAAGACAAA
GACATTCACG AAAAAGTCAA AGCGGAAAAT CACATCATGG CATCCCCAGC CGAGCGCCAA
GCTTTACGAG ATGTTTTAGA ACTAGGCTTT GCTGATGCTT TTCGCAAATT CACCACCGAA
GGCGGACACT TTAGTTGGTG GGATTATCGC GCAGCCTCTT TCCGCCGCAA CCAAGGTTGG
CGCATAGATC ATCACTACCT CACACCAGTA CTATACGAAC AGGCAAAAAG TTGCATTATT
GATGTCTCCC CCAGAAAATT AACTCAACCA AGCGACCATA CTCCCGTCAT TGTCGAAATT
TAA
|
|---|
| Protein sequence | MKIATWNVNS IRTRLEQVVD WLKQNPVDVL CLQETKVIDH DFPRSPFENL GYHSYISGQK
AYNGVALISQ QQLTDVTTGF TPILPDIEPI WDEQKRVITG VIDGVRIVNL YVPNGSAIAS
EKYEYKLRWL TVLKEYLRSL LLLQPSICIC GDFNIALEDK DIHEKVKAEN HIMASPAERQ
ALRDVLELGF ADAFRKFTTE GGHFSWWDYR AASFRRNQGW RIDHHYLTPV LYEQAKSCII
DVSPRKLTQP SDHTPVIVEI
|
|---|
| |