Gene Ava_2549 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_2549 
SymbolrplS 
ID3679453 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp3152228 
End bp3152620 
Gene Length393 bp 
Protein Length130 aa 
Translation table11 
GC content46% 
IMG OID637717894 
Product50S ribosomal protein L19 
Protein accessionYP_323059 
Protein GI75908763 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0335] Ribosomal protein L19 
TIGRFAM ID[TIGR01024] ribosomal protein L19, bacterial type 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value1.88294e-09 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCGTGA GTTTTTTAAA CAAACAGACC ATGAGCGCTC AAGAAATCAT CCGTTCCATA 
GAAGCGGAAC AACTAAAATC TAATCTGCCC GAAATTTACA TCGGTGATAC CGTCAGAGTC
GGTGTGAAGA TTAAAGAAGG TGATAAATAT CGTGTGCAAC CCTATGAAGG CGTTGTTATC
GCCAGACGCA ACGGTGGTAT TAACGAAACA ATCACCGTCC GCCGCGTCTT CCAAGGCGTT
GGTGTAGAAC GGGTATTCCT ACTGCACTCA CCCCGGATTG ACAACATCAA AGTACTACGT
CGTGGTAAAG TAAGACGTGC TAAACTGTAT TATCTACGTG GTCGCGTAGG TAAAGCCACC
CGGATCAAGC AACGGTTCGA CCGTTCTCTA TAA
 
Protein sequence
MIVSFLNKQT MSAQEIIRSI EAEQLKSNLP EIYIGDTVRV GVKIKEGDKY RVQPYEGVVI 
ARRNGGINET ITVRRVFQGV GVERVFLLHS PRIDNIKVLR RGKVRRAKLY YLRGRVGKAT
RIKQRFDRSL