Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ava_2536 |
Symbol | |
ID | 3682421 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anabaena variabilis ATCC 29413 |
Kingdom | Bacteria |
Replicon accession | NC_007413 |
Strand | + |
Start bp | 3136809 |
End bp | 3137534 |
Gene Length | 726 bp |
Protein Length | 241 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 637717881 |
Product | short chain dehydrogenase |
Protein accession | YP_323046 |
Protein GI | 75908750 |
COG category | [R] General function prediction only |
COG ID | [COG4221] Short-chain alcohol dehydrogenase of unknown specificity |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 48 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTTTGG AGCAGAAACG ACGCGCTCTG ATTACTGGGG CAAGTAGTGG AATTGGCAAA GCAACGGCAT TAGCCTTTGC AAAAGCAGGA ATAGATGTGG CTTTGGTGAG CCGTTCTGGG GATAAATTGA CACCTGTAGT AGAAGCAACA AAACAGACTG GAGTAGTAGC CAAAGCGTAT ACTGTAGACT TAGCAGACGT ATCGCAAGTA GAGGCGAAAA TCCAGGCGAT CGCCATTGAC TTTGGAGACA TAGATATTCT TGTAAATAAT GCGGGTGTAG CATACACAGC TACCTTAAGT GAAACGCCCT TAGCAGACTG GCAACAAGTA ATTAACTTGA ACCTGACCAG CGTATTTGAA TGTATTAAAG GAATTTTGCC AAGAATGCGC GCTCGGCATA CAGGCACAAT CATCAATGTG TCTTCGATTG CAGCGAAACA ATCTTTTCCG CACTGGGGAG TTTACAGCGT CAGTAAAGCA GGATTAATGG CACTTTCTCA AACCTTGGCA CAAGAAGAAC GTGTCCACGG CATTCGGGTA AGTGCGATTT GTCCAGGGGC TGTAAATACT GGACTTTGGG ATACAGAGAC GGTTAAAGCT GACTTTGACC GTTCCAAAAT GCTCACCCCA GAAATTGTGG CTCAGTCAAT TCTTTACACT GCACTATTAC CACCACAAGC AGTCATTGAT GAATTGACGC TCATGCCCAG CGCAGGTGCG CTGTAA
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Protein sequence | MSLEQKRRAL ITGASSGIGK ATALAFAKAG IDVALVSRSG DKLTPVVEAT KQTGVVAKAY TVDLADVSQV EAKIQAIAID FGDIDILVNN AGVAYTATLS ETPLADWQQV INLNLTSVFE CIKGILPRMR ARHTGTIINV SSIAAKQSFP HWGVYSVSKA GLMALSQTLA QEERVHGIRV SAICPGAVNT GLWDTETVKA DFDRSKMLTP EIVAQSILYT ALLPPQAVID ELTLMPSAGA L
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