Gene Ava_2512 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_2512 
Symbol 
ID3682609 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp3106302 
End bp3107357 
Gene Length1056 bp 
Protein Length351 aa 
Translation table11 
GC content50% 
IMG OID637717855 
Productphotosystem II reaction centre protein PsbD/D2 
Protein accessionYP_323022 
Protein GI75908726 
COG category 
COG ID 
TIGRFAM ID[TIGR01152] Photosystem II, DII subunit (also called Q(A)) 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value1.39889e-12 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.112901 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCATCG CAGTAGGAAG GGCCCCCAGT AGAGGGTGGT TTGACGTACT AGACGACTGG 
TTAAAGCGCG ATCGCTTCGT ATTCGTAGGT TGGTCAGGGA TATTATTATT TCCTTGCGCC
TTCCTAGCAC TAGGCGGTTG GCTAACCGGT ACAACATTTG TCACATCGTG GTACACCCAC
GGACTAGCAT CATCCTACCT GGAAGGAGCA AACTTCCTGA CAGTAGCAGT ATCAAGCCCA
GCAGACAGCA TGGGACACTC CCTGTTGTTG TTGTGGGGAC CAGAAGCCCA AGGGGACTTT
ACCCGTTGGT GTCAGCTAGG GGGGTTATGG CCATTCGTAG CCCTACACGG AGCCTTCGGT
TTGATCGGAT TCATGCTACG TCAATTTGAA ATTGCGCGCC TAGTAGGAAT CAGACCCTAC
AACGCACTAG CATTTTCAGC ACCCATAGCG GTATTCGTCA GCGTATTCCT GATGTACCCA
TTGGGACAAT CATCTTGGTT CTTTGCACCA AGCTTTGGAG TAGCAGCAAT CTTCAGATTC
TTGTTATTCC TCCAAGGGTT CCACAACTGG ACACTCAACC CCTTCCACAT GATGGGAGTA
GCAGGTGTAC TAGGTGGAGC GCTACTGTGC GCCATCCACG GTGCAACAGT AGAAAACACC
TTATTTGAAG ACGGCGAAGG CGCAAACACC TTCCGCGCCT TCAACCCCAC CCAATCAGAA
GAAACCTATT CAATGGTGAC AGCGAACCGA TTCTGGTCAC AGATATTCGG GATTGCTTTC
TCCAACAAAC GCTGGTTGCA CTTCTTCATG TTGTTCGTAC CCGTCACTGG GTTGTGGATG
AGTGCGGTAG GCATCGTTGG TTTAGCATTG AACCTGCGGG CTTATGACTT CGTTTCCCAA
GAATTACGGG CAGCAGAAGA CCCAGAATTT GAAACCTTCT ATACCAAGAA CATTTTGCTG
AACGAGGGTA TCCGCGCTTG GATGGCTCCT CAAGATCAGC CTCACGAAAA ATTTGTATTC
CCCGAAGAAG TATTACCTCG CGGTAATGCT CTCTAA
 
Protein sequence
MTIAVGRAPS RGWFDVLDDW LKRDRFVFVG WSGILLFPCA FLALGGWLTG TTFVTSWYTH 
GLASSYLEGA NFLTVAVSSP ADSMGHSLLL LWGPEAQGDF TRWCQLGGLW PFVALHGAFG
LIGFMLRQFE IARLVGIRPY NALAFSAPIA VFVSVFLMYP LGQSSWFFAP SFGVAAIFRF
LLFLQGFHNW TLNPFHMMGV AGVLGGALLC AIHGATVENT LFEDGEGANT FRAFNPTQSE
ETYSMVTANR FWSQIFGIAF SNKRWLHFFM LFVPVTGLWM SAVGIVGLAL NLRAYDFVSQ
ELRAAEDPEF ETFYTKNILL NEGIRAWMAP QDQPHEKFVF PEEVLPRGNA L