Gene Ava_2508 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_2508 
Symbol 
ID3682605 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp3101621 
End bp3102583 
Gene Length963 bp 
Protein Length320 aa 
Translation table11 
GC content48% 
IMG OID637717851 
Productcysteine synthase 
Protein accessionYP_323018 
Protein GI75908722 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0031] Cysteine synthase 
TIGRFAM ID[TIGR01136] cysteine synthases
[TIGR01139] cysteine synthase A 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.000293117 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.173804 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGGGTTG CTCGTAACAT TACAGAACTT GTGGGTCGTA CACCTTTAGT ACAGCTAAAT 
CGCATTCCTC AAGAGGAAGG ATGTGTAGCT CAGATTCTTG TGAAGATGGA AAGCATGAAT
CCATCATCAT CTGTGAAAGA CCGAATTGGG GTGAGTATGA TTAATGCAGC TGAACAGGAG
GGGTTGATTG CTCCTGGGAA GACTGTATTA GTCGAACCCA CATCGGGAAA TACGGGGATT
GCTTTAGCAA TGGCAGCAGC AGCCAAGGGT TATCGCTTAA TTTTAACGAT GCCAGAAACC
ATGAGTGGTG AGCGTCGGGC TATGTTGCGG GCTTATGGAG CGGAGCTAGA ATTGACACCA
GGAATGGAAG GAATGAGTGG AGCAATTCGC CGCGCCCAGG AGATAGTGAA TACTACCCCT
CACGCTTATA TGTTGCAGCA GTTCCGTAAT CCAGCGAACG TGAAAATACA TCGGGAGACT
ACCGCCGAGG AAATCTGGGA AGATACCGAT GGTCAGGTAG ATATGATTGT CGCAGGGGTG
GGTACAGGTG GTACGATCAC AGGTGTAGCG GAAGTACTGA AAGCCCGTAA ACCAAGTTTT
CAGGCGATCG CAGTTGAGCC TGCCAATAGT CCAGTTTTAT CTGGAGGTAA ACCAGGCCCC
CATAAAATTC AGGGAATTGG TGCGGGATTC GTTCCCCAAG TCCTAAAAAC ACAATTGATT
GATGAAGTGA TTACGGTCAC AGATGAAGAA GCGATCGCTT ATGGTCGGCG TTTAGCTAGA
GAAGAAGGGC TATTATCTGG GATTTCCAGT GGTGCTGCTT TGTGTGCTGC CATTCGCGTA
GCTCAACGTC CAGAAAACGC AGGACGCTTA ATTGTATTGA TTCAGCCTAG TTTTGGAGAA
AGGTATCTGA GTACACCATT GTTCCAAGAC CTAGAAACGA AGGTAACAGC TAGCATTAGC
TAA
 
Protein sequence
MRVARNITEL VGRTPLVQLN RIPQEEGCVA QILVKMESMN PSSSVKDRIG VSMINAAEQE 
GLIAPGKTVL VEPTSGNTGI ALAMAAAAKG YRLILTMPET MSGERRAMLR AYGAELELTP
GMEGMSGAIR RAQEIVNTTP HAYMLQQFRN PANVKIHRET TAEEIWEDTD GQVDMIVAGV
GTGGTITGVA EVLKARKPSF QAIAVEPANS PVLSGGKPGP HKIQGIGAGF VPQVLKTQLI
DEVITVTDEE AIAYGRRLAR EEGLLSGISS GAALCAAIRV AQRPENAGRL IVLIQPSFGE
RYLSTPLFQD LETKVTASIS