Gene Ava_2484 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_2484 
Symbol 
ID3682835 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp3081339 
End bp3081779 
Gene Length441 bp 
Protein Length146 aa 
Translation table11 
GC content33% 
IMG OID637717827 
Producthypothetical protein 
Protein accessionYP_322994 
Protein GI75908698 
COG category[R] General function prediction only 
COG ID[COG0824] Predicted thioesterase 
TIGRFAM ID[TIGR00051] acyl-CoA thioester hydrolase, YbgC/YbaW family 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value0.838963 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.0924158 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTAACAG TAAATAACTC ACATAGAGCA TTAGAAGTAA CCTTGCAAAT ACCTGTAAGA 
ACTTATGAAA TTGACTTTGC TGGAATTGTC AGCAACATTG TGTATATTAA GTGGCTAGAA
GATTTACGTT TAAAATTTCT AGAAGAACAT TTTCCCATTC ATCAACAAAT TGAGCAAGGA
TATGTACCCA TACTTACTGG GACAGAAATT GAATATAAAC GTCCCATTAA GTTAATTGAT
CAAGTAATTG GACGCTTATG GGCAAGTAAT TTGGGACGAT TAAAATGGAC AGTCCAAGCA
GAGATTTTAG CAAACAATCA ACTAGCAGCA GTTGCTCAAC AGAAGGGTGC TTTTGTAAAT
TTACAAAATG GTCGTCCAGT GAGAATCCCA GATGAATTAC AGCAAAAATA TTTAAATATT
ACTAAATTAA ATAATGAATA A
 
Protein sequence
MLTVNNSHRA LEVTLQIPVR TYEIDFAGIV SNIVYIKWLE DLRLKFLEEH FPIHQQIEQG 
YVPILTGTEI EYKRPIKLID QVIGRLWASN LGRLKWTVQA EILANNQLAA VAQQKGAFVN
LQNGRPVRIP DELQQKYLNI TKLNNE