| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ava_2420 |
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| Symbol | |
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| ID | 3683102 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Anabaena variabilis ATCC 29413 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007413 |
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| Strand | - |
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| Start bp | 3006101 |
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| End bp | 3008902 |
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| Gene Length | 2802 bp |
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| Protein Length | 933 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 637717765 |
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| Product | PAS/PAC sensor hybrid histidine kinase |
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| Protein accession | YP_322932 |
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| Protein GI | 75908636 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5002] Signal transduction histidine kinase |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.42243 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 2 |
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| Fosmid unclonability p-value | 0.0000359369 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGTCCGAAT TACTATATAC ATTTTTTATA ACGATTACAG CCATTATTTT TCTGTACACA
GCCTTTGTCT GTGTAAAACT AATTGCAAAA GCTGGGAAAT TTCCTAGCAA CGTACAGTTA
GAAGCAACAA ATCAAAAATT GCAACAGGCA ATTTTAAACA GTGCCAATTA CACAATTATT
TCCACCACAC CAGACGGCAT AATTCTGACA TTTAATGCGG CTGCACAACG ATGGCTGGGA
TATACCGCCG AAGAAGTGAT TGGTAAAACA ACCCCAGAAA TTGTCCACGA TAAAAATGAA
GTCGTGAAAG TGGCACAAGA ACTATCTCAA GAGTTAGGGG TAACCATTGA ACCTGGATTT
GAGGTTTTTG TGGCTAAAGC ACGACTGGGA CAGGTGGAAG AACGGGAATG GACTTACATT
CGTAAAGATG GTTCGCGTTT CCCAGTGCTG CTATCTGTTA CACCTTTGTA TGATGCAGAA
GAAAATATTA CCGGTTTTCT GGGTATTGGT AGTGATATTA CTGCTCGCAA ATTGGCAGAA
GCAGCTTTAC GAGAAAGTGA ATATCGTTAT GCCACCCTGG CACAAACCGC ACCAGTAGGC
ATTTTTCGTA ATGATGCTTC TGGGCGGTGC ATTTTTGCTA ATGAAAGAGC TTGCAATTTA
ATTGGTTCAC CCCTCGAAGA CATCTTGGGT GAAGGCTGGG TACAATCCCT GCATCCAGAC
GATCGCCTGC GTATTGTGAG GGAATGGAAT CAAGCCATAA AGCAAAATTT ACCGTTTAAA
GCAGAGTATC GTTTTCGCCA TCCCAATAAC GTCATTAACT GGGTAATCTC CCAAGCAATC
CCCGAAAGAG GAAGTGATGG AGAGGTGACA GGATACATCG GCACAATGAC GGACATTAAC
GATCGCAAAC GAGCCGAAGA AGAACTGCTT CACCTCAGCC AAGCCTTGGA AAGCGCTGTG
GAAGGTATCT CTCAGTTAGA TACTCAGGGA CATTACATTA AAGTAAATCC AGCCTACGCC
CAGATAACTG GCTACACACC AGAAGAGATG ATTGGCATGG AGTGGACATC AACTGTTCAT
CCAGATGACC AAGAAAAAAT GATGGCTGCC TATCGCCAAA TGCTGAAAAA TGGCAAGGTA
GAAATGGAAG CTAGAGCCAT GCGTAAAGAT GGTTCAGCTT TTTATAAACA AGTAGTAATG
GTGAAAGCCT ATAACCAACA GCAGGAATGT ATCGGCCATT ATTGCTTTAT GAAGGATATT
AGTGATCGCC GTGAAGTCGA ACGCCTCAAA GATGAATTTG TCTCTGTCGT CAGTCACGAA
TTACGCACCC CTTTAACTTC CATTTCTGGC GCTTTAGACT TATTAGCTAG CAAAGTCGTG
CCGGCAGGTT CTGAAGATGC CCAACGGATG CTCAACATTG CCGCTAATAA TACTGATAGA
TTGGTGCGTC TGATCAATGA CATCCTAGAT ATTGAACGCA TTGAGTCGGG AAAAATCCAA
ATTACTCCCC AAGCTTGCAA TGCTGCCGAC TTAATGACCC AATCAGTAGA AGTGATGGAG
GAATTAGCAG AGCAAGGGGG AATACAATTA GCAATGTCAC CTTTATCAGC TCACCTTTGG
GCAGATCCCG ATCGCATCAT CCAAGTATTT ACCAACCTCA TCAGCAATGC CATTAAATTC
TCCCCTGCTG GGGCTACAGT TTGGGTGACT GCTAAAATTC CCGAAAAAAG TGAGCTAGAA
AAATTCCCTA ACCCTGTGAT CCTGTTTGAA GTCAAAGACC AAGGTCGGGG TATTCCGGCT
GATAAATTGG AATCTATCTT TGAGCGTTTT GGGCAAGTTG ATGCCTCCGA CTCCCGTCAA
AAAGGTGGCA CAGGTTTGGG CTTGGCTATC TGTCGCAGCA TTTTGCAGCA TCATGGAGGA
CGAATCTGGG CTGAAAGCAC CTTGGGCGAG GGTAGCACCT TCTTTTTTAC CTTGCCAATT
TTTCCAGAAG AGCAGAATCA AGAAGAAGAG TTTCTACATC GCCCCCACAC CACACCTCAG
CACCCCAAAA ACTCAACCTC TCCTCTGATA CTCCATTGCG ATGATGATTT TTCCGTGCGA
GCTGTTATGC AAGTCATCCT CGAAAAGCAA GGTTATCAAG TCATGACCGT GGCATCAGGA
AAAGAAGCTG TAGAAAAGGC GAAATTCAAC CAACCTGATG CAATTATTCT CAATCTCATG
ATGCCAGATA TAGATGGTTG GGAAACATTA GCACTGCTCA AACAGCAGCC AGAAACTCAA
AACGTTCCCG TAATTATTCT TAGTGGTGTA ACACCTGACC ATAATAAAGA ACTTTCCCAC
GATGTTAGTG ATTGGATTAT CAAACCTCCC GATGTGAAGT TGTTATGCCG AGCTTTAGAA
AAAGCTACCA CCAAGCAACA AGCCATCAAA GTACTAGTTG TGGAAGATGA CCCAGATTTA
GCACAAGTAT TGATTGCTAT GTTCAATCGT CACGGCATTT CTACCTTCTA TGCCCAAAAA
GGACGGGAAG CCATTCAAAT TAGTCAAAAT ATCATTCCCG ACTTGTTGGT ACTAGATTTG
GGATTACCCG AATGGGATGG TTTTGCCGTG GTGGACTGGT TGCGGCAGCA TCAGCATTTG
TATCATGTAC CTTTAGTAGT TTACACAGCC CGCGATTTAG ATGAGAGCGA TCGCCAAAGA
TTAAAATTAG GGGAAACATT ATTTCTCACT AAAGGACGCA TTAACCCCCA AGAATTTGAG
CAGCGTGTCA TTACCTTACT CAACAGAATA ATTTGCAATT AG
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| Protein sequence | MSELLYTFFI TITAIIFLYT AFVCVKLIAK AGKFPSNVQL EATNQKLQQA ILNSANYTII
STTPDGIILT FNAAAQRWLG YTAEEVIGKT TPEIVHDKNE VVKVAQELSQ ELGVTIEPGF
EVFVAKARLG QVEEREWTYI RKDGSRFPVL LSVTPLYDAE ENITGFLGIG SDITARKLAE
AALRESEYRY ATLAQTAPVG IFRNDASGRC IFANERACNL IGSPLEDILG EGWVQSLHPD
DRLRIVREWN QAIKQNLPFK AEYRFRHPNN VINWVISQAI PERGSDGEVT GYIGTMTDIN
DRKRAEEELL HLSQALESAV EGISQLDTQG HYIKVNPAYA QITGYTPEEM IGMEWTSTVH
PDDQEKMMAA YRQMLKNGKV EMEARAMRKD GSAFYKQVVM VKAYNQQQEC IGHYCFMKDI
SDRREVERLK DEFVSVVSHE LRTPLTSISG ALDLLASKVV PAGSEDAQRM LNIAANNTDR
LVRLINDILD IERIESGKIQ ITPQACNAAD LMTQSVEVME ELAEQGGIQL AMSPLSAHLW
ADPDRIIQVF TNLISNAIKF SPAGATVWVT AKIPEKSELE KFPNPVILFE VKDQGRGIPA
DKLESIFERF GQVDASDSRQ KGGTGLGLAI CRSILQHHGG RIWAESTLGE GSTFFFTLPI
FPEEQNQEEE FLHRPHTTPQ HPKNSTSPLI LHCDDDFSVR AVMQVILEKQ GYQVMTVASG
KEAVEKAKFN QPDAIILNLM MPDIDGWETL ALLKQQPETQ NVPVIILSGV TPDHNKELSH
DVSDWIIKPP DVKLLCRALE KATTKQQAIK VLVVEDDPDL AQVLIAMFNR HGISTFYAQK
GREAIQISQN IIPDLLVLDL GLPEWDGFAV VDWLRQHQHL YHVPLVVYTA RDLDESDRQR
LKLGETLFLT KGRINPQEFE QRVITLLNRI ICN
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