| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ava_2399 |
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| Symbol | |
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| ID | 3683198 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Anabaena variabilis ATCC 29413 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007413 |
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| Strand | + |
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| Start bp | 2982297 |
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| End bp | 2983700 |
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| Gene Length | 1404 bp |
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| Protein Length | 467 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 637717744 |
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| Product | secretion protein HlyD |
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| Protein accession | YP_322911 |
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| Protein GI | 75908615 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1566] Multidrug resistance efflux pump |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.105564 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 2 |
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| Fosmid unclonability p-value | 0.0000263844 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCTGTATA TTCAAAATAA GAAACTTATC CCGCCTCTGC AAGATGATGA TGCTTTACCA
CCAGTTGGTA TTTGGACATC TTTGCTGGGG TTATTTCTTA TAGTGTCTGT TGGTTCAGCG
ATCGCCTTAT CCTCATGGAT TAAATATAAT GTTGTCATCA AGGCTGGGGC TACTGTTCGT
CCTATAGGCG AAACTCGCTT GGTACAGCCG GAAATTGAGG GGACGATTCA GAATCTCTTC
GTAACGGAAA ATCAAGTTGT CAAGCGGGGT GATGCGATCG CTACTCTCAA TACTGAGCAG
TTACAAATCA AGCAAAGTCA ACTACAAGGT AATATCCAAC AAATTAAATT ACAGCTTGTG
CAAGTTGATG CTCAAATCAG CACTTTCAAT AGTCAGATAC TCGCGGAAAC CAAGGTAATC
GAGCGTACTG TGGCTTCTGC TCAAGCAGAT TTGGCTCGTA ATCAACGAGA ATATCAAGAA
CGTCAAATCA CTACACAAAG TGAATATATC GCCTCTGAAG CTAGTTTGCA AAAAGCTATC
GCAGATTTAC GTAAATCTCA AGCTGATTTG AATTTTGCTA ACGCAGATCG CGATCGCTAT
CAGCAATTAG CTGATATTGG TGCGATTGGT AGACGGGAAT ATGAACAGAA AAAACTCGTG
GTAGAACAAG CTAAATCCGC CTTGGAAGCG GGAAAGCGCT CTGTGGAAAT CGCTCAAGCC
AAAATGCAAT CAGCAAGGGC TGGGGTTAAT CCCAGCATGG CAACGGTGGC GATCGCGCAA
GAACGTATTG CTCAAGAAAT TGCTAGGGGT GAAGCTACTA TCGCTACGTT ACAGAAAGAA
CAGCAAGCTT TAGTTCAGCG ACGTTTAGAA ATGCTGTCCC AACTCAACCA ATCCCAAAAA
GAATTACAAC AAGTAGAAAA GCAACTGCAA AGCAGCGTAA TTCGCGCTAC CAGTGACGGT
ATTATCCTGA AGTTAAATCT GCGGAACCCT GGTCAAGTAG TACGTACTAG TGAGGCGATC
GCAGAAATAG CACCACAAAA TGCGCCGCTA GTAATTAAAG CAATGATTCC CACCGCAGAC
ATTAAAAAGG TGGAAGTGGG GAAGAAAGTT CAATTGCGTG TTAATGCTTG TCCTTACCCA
GATTATGGTG TTCTCCATGC TGTGGTGAGT GCTGTTTCTC CAGATGCGAT CGCACCTCAA
AATAACAATC CAGGGGGAGC ATTATCGGCT GCTGCAACTC CTTATTTTGA AGCTACTATC
CAACCAGAAA AAATCTCATT TGGGAATGGC GATCGTCAGT GTCATATCCA GTCAGGTATG
CAGGCAGAGG CTCATATTAT TTCTCAGGAG GAGACAGCAC TACGATTCAT CCTCAGAAAA
GCAAGACTTA TCACTGATTT ATAG
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| Protein sequence | MLYIQNKKLI PPLQDDDALP PVGIWTSLLG LFLIVSVGSA IALSSWIKYN VVIKAGATVR
PIGETRLVQP EIEGTIQNLF VTENQVVKRG DAIATLNTEQ LQIKQSQLQG NIQQIKLQLV
QVDAQISTFN SQILAETKVI ERTVASAQAD LARNQREYQE RQITTQSEYI ASEASLQKAI
ADLRKSQADL NFANADRDRY QQLADIGAIG RREYEQKKLV VEQAKSALEA GKRSVEIAQA
KMQSARAGVN PSMATVAIAQ ERIAQEIARG EATIATLQKE QQALVQRRLE MLSQLNQSQK
ELQQVEKQLQ SSVIRATSDG IILKLNLRNP GQVVRTSEAI AEIAPQNAPL VIKAMIPTAD
IKKVEVGKKV QLRVNACPYP DYGVLHAVVS AVSPDAIAPQ NNNPGGALSA AATPYFEATI
QPEKISFGNG DRQCHIQSGM QAEAHIISQE ETALRFILRK ARLITDL
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