Gene Ava_2394 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_2394 
Symbol 
ID3683193 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp2974646 
End bp2976868 
Gene Length2223 bp 
Protein Length740 aa 
Translation table11 
GC content36% 
IMG OID637717739 
Producthypothetical protein 
Protein accessionYP_322906 
Protein GI75908610 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG3914] Predicted O-linked N-acetylglucosamine transferase, SPINDLY family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000509541 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value6.24153e-05 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCTCGATT TAACTGCTAC AGCTCAATGG CATCAGCGTG CAGAGAAATT CTTCCTGTCA 
GGAAATTACA TTCAGGCTGC TAATATCTAT GAAGAAGCTA TTGCCGCAGA ACCTGAGATT
AAATTACATT ATTGCTACTT GGGTTTAATG TTACTGTTAC TAGGACAAGA TGCAGAAGCT
AAAGAAACTT GGCTTCTAGC TGTTAAAGAA GAAGAATCAG AGCAATTTGA GGCTTTTAAA
ACGGAATTGT TCAAAACTTT ACAAACAGAA GCCGAACGTC GAGAAGATAT AGAAGAATAT
TCCGTAGCTA AAAAAATTCG CTTAATTCTG AGAGAACTTT ACCCCCACGA CATTCACAAC
TTATTACATT TGGTACAACT TGGAATTAAG CTAGAAACCT ATCAAGGTGA GAATTTACAT
AATTTGGGTG TAATTGAAAT CCTGAAATCT GAACCAAAGG TAGAAGTCAA CTTAGAATCG
TTGATGACAA CTGTCAAGAG TGTTTTAGAT TATGCACCTG CGCACCCATC AACATTGGAT
TTAGTAGAAG CCTGCTTACC ATATTGCCAA AATAATCCAC CAGTTTTGCT GATTATTGTT
TTATCATCTC TGGCGGAGGT TCTTCAATCC GAACGACTAC CTCTGGTAGC AGCAAAGTTA
TGTGAACTCT GTTTAGAATT AAGCCCCAAT AACCCAAAGT TTGTATTACA TTTGGCTGAT
TTTTATCAAG ATGCTGGTCA ATACAAAAAG AGTATAGAAT CTGCTAAATT ATTTTATTCT
TTGGTTCAGC GATTAGTAAA TAAAGTTTAT GCTACCTGTC TGATTCTTAG GGGATTAATG
AGTGCTAATG GGTATTGTGA AGAATCATTA TCTGTATATC AGAGACATGA ATTATTAGTG
AAATCTCTTA TAGAAGAAAA CCCTACAAAT CTTGATTCTT CAACAACAAT AAGAGTAAGT
ACTACCAATT TCTTTGCGCC GTATATTGAA GATAATCCCA GAAAAAATAG ACACATTCAA
AATCAATTAT TACAAGTCTG TCAAGTCAAT ATAAATAATT ATTCTCAAGA ACAAATAGAG
AAATATAAGC GGGGACACAT AAAACGCAAA AGACAAAATC GAACTAATGA AAAAATAAAT
ATAGGATATC TCTCTTCTTG TTTAAAAATA CATTCTGTTG GTTGGCTAGC ACGCTGGCTA
TTTCAGTATC TAAACCAAGA CAAATTTAAT ATAAACGCCT ATTTTGTTAA TACTAATCCC
AAATCTGATC CATTACATGA ATGGTATCTC AAGCAAGTAG GTAAAGTTTA TAAATCAAAT
AATAGTTTTG AAATAGCAGA ACAAATATAT CAAGATGAGA TTGATATTTT AGTTGATTTA
GATAGTATTA CCCTAAATCT TATTTGTGAA GTGATAGGAC TAAAACCTGC ACCCATTCAA
GTCACTTGGT TAGGTTGGGA TGCTTCAGGA AGCCCAGCAG TAGATTATTT CATTGCTGAC
CCCTATGTTT TACCAGAATA TGCACAGGAA TACTACCAAG AAAAAATTTG GCGTTTACCT
CAAACTTATA TAGCTGTGGA TGGTTTTGAG GTGAGTGTAC CTACAATACG TCGTGAGCAG
TTAGATATTC CTCGTGATGC AATAGTCTAT TTTTCTGGTC AGCGAGGTTT TAAGCGACAT
CCCCACACAA CAAGACTACA ATTAAAAATC ATCAAAGAAG TTCCTAATAG CTACTTTCTG
ATTAAAGGAG TATCCGAAGA AGAAGGTATT AAAAAATTCT TTGAGCAATT GGCAGAAGAA
GAAGGTGTAG AACTTTCAAA ACTGAGATTT CTTCCCATCG ATTCTACAGA ACCAATTCAC
CGAGCTAATT TAGAAATTGT CGATATAGTA TTAGATACCT ATCCTTACAA TGGAGCTACA
ACGACCCTAG AAACTCTGTG GATGTGTATT CCTATGGTGA CGCGGGTAGG TGAGCAATTT
GCTGCGCGCA ACAGCTACAC CATGATGATG AATGCTGGAA TTCCAGAAGG GATAGCTTGG
ACTGATGAAG AGTATGTAGA TTGGGGTGTG CGTTTGGGTA AGGACGAGGT TTTAAGACAG
CAAATTGTTT GGAAGCTAAA ACAGTCAAGG AAAACATCAC CTCTATGGAA TGGTAAGCAA
TTTACCCGTG AGATGGAGAA CGCTTACGAA CAGATGTGGC TGAGGTATCT GGAAGAAGCA
TAA
 
Protein sequence
MLDLTATAQW HQRAEKFFLS GNYIQAANIY EEAIAAEPEI KLHYCYLGLM LLLLGQDAEA 
KETWLLAVKE EESEQFEAFK TELFKTLQTE AERREDIEEY SVAKKIRLIL RELYPHDIHN
LLHLVQLGIK LETYQGENLH NLGVIEILKS EPKVEVNLES LMTTVKSVLD YAPAHPSTLD
LVEACLPYCQ NNPPVLLIIV LSSLAEVLQS ERLPLVAAKL CELCLELSPN NPKFVLHLAD
FYQDAGQYKK SIESAKLFYS LVQRLVNKVY ATCLILRGLM SANGYCEESL SVYQRHELLV
KSLIEENPTN LDSSTTIRVS TTNFFAPYIE DNPRKNRHIQ NQLLQVCQVN INNYSQEQIE
KYKRGHIKRK RQNRTNEKIN IGYLSSCLKI HSVGWLARWL FQYLNQDKFN INAYFVNTNP
KSDPLHEWYL KQVGKVYKSN NSFEIAEQIY QDEIDILVDL DSITLNLICE VIGLKPAPIQ
VTWLGWDASG SPAVDYFIAD PYVLPEYAQE YYQEKIWRLP QTYIAVDGFE VSVPTIRREQ
LDIPRDAIVY FSGQRGFKRH PHTTRLQLKI IKEVPNSYFL IKGVSEEEGI KKFFEQLAEE
EGVELSKLRF LPIDSTEPIH RANLEIVDIV LDTYPYNGAT TTLETLWMCI PMVTRVGEQF
AARNSYTMMM NAGIPEGIAW TDEEYVDWGV RLGKDEVLRQ QIVWKLKQSR KTSPLWNGKQ
FTREMENAYE QMWLRYLEEA