Gene Ava_2346 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_2346 
Symbol 
ID3683461 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp2909722 
End bp2910705 
Gene Length984 bp 
Protein Length327 aa 
Translation table11 
GC content40% 
IMG OID637717691 
Productglycosyl transferase family protein 
Protein accessionYP_322859 
Protein GI75908563 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0463] Glycosyltransferases involved in cell wall biogenesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGCCTA AATATTCTTT TATCGTCCCG ATTTACAACG AAGAAGAAAC CATCACAGAA 
ATGTATCGCC GCATTTCCCA GGTAATGGAT CAGATGGATG GTTCAGTCGA GTTGTGTTTA
GTTAATGATG GCAGCCGCGA TCGCTCTCTG AGAATGATGC GAGAATTACA TCAAAAAGAT
CCGCGTGTTG TTTACTTAAG TCTTGCCAGA AATTTTGGTC ATCAAATCGC CGTTACCGCA
GGTTTAAATT TTGCCCGTGG ACAAGTAGTT GTGATTCTCG ATGCCGATTT ACAAGATCCA
CCAGAATTGA TCGCGGAAAT GGTGGAATTA TGGCGGCAAG GATATCATAT AATTTACGCC
CAAAGAATCA AACGCCGTCA AGAAGGCTGG TTTAAACGCT TCACCGCCTA TACTTTTTAT
CGGATTCTCA AACAACTGGC AGATGTTGAT ATTCCTACAG ATACCGGAGA CTTTTGTTTA
TTAGATAGGC AAGTTGTTGA TGTACTCAAT GCTATGCCAG AGCGAAATCG TTACATTCGC
GGCTTGCGTT CTTGGGTAGG TTTTAACCAA ACAGCCGTTA AATTTGAACG AGATCCTCGT
TTTGCTGGCG ATGTTAAATA TACATTTCGT AAATCTTTTG CATTGGCAAT TAATGGCATA
GTTTCCTTTT CTAAGGTACC ATTAAGGCTT TCAACTTATT TAGGACTATT TGCAGCAATA
GCCTCATTAT TAATGTGTCT GTTAGTTTTA TACTGGCGGA TTTTTACACC CCATTCTCCC
CTAACTGGAA TCACCATTAT TCTCATCGCT ATCTTCTTTT TGGGAGCAGT ACAACTGGTG
AGTATTGGTA TTTTAGGTGA ATATATCGGG CGAATTTATG AAGAGGTTAA ACAAAGACCA
CTTTATACAT TGTCAGAAGT TAGCGGCTTT GAGCAGCAAT ATCCTGATGC TCAACAATCA
TTAGATATTT CTTCATCCAA TTAA
 
Protein sequence
MPPKYSFIVP IYNEEETITE MYRRISQVMD QMDGSVELCL VNDGSRDRSL RMMRELHQKD 
PRVVYLSLAR NFGHQIAVTA GLNFARGQVV VILDADLQDP PELIAEMVEL WRQGYHIIYA
QRIKRRQEGW FKRFTAYTFY RILKQLADVD IPTDTGDFCL LDRQVVDVLN AMPERNRYIR
GLRSWVGFNQ TAVKFERDPR FAGDVKYTFR KSFALAINGI VSFSKVPLRL STYLGLFAAI
ASLLMCLLVL YWRIFTPHSP LTGITIILIA IFFLGAVQLV SIGILGEYIG RIYEEVKQRP
LYTLSEVSGF EQQYPDAQQS LDISSSN