| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ava_2325 |
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| Symbol | smpB |
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| ID | 3683595 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Anabaena variabilis ATCC 29413 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007413 |
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| Strand | + |
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| Start bp | 2887118 |
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| End bp | 2887585 |
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| Gene Length | 468 bp |
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| Protein Length | 155 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 637717670 |
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| Product | SsrA-binding protein |
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| Protein accession | YP_322838 |
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| Protein GI | 75908542 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0691] tmRNA-binding protein |
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| TIGRFAM ID | [TIGR00086] SsrA-binding protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 0.595693 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAGCGATA AGAGCGAAAG TTACAAAGTA ATTACTGATA ATCGACAAGC CCGTTACTTG
TACGAAATCC TGGAAACTTT TGAAGCCGGC ATTCAGTTGA CAGGAACAGA GGTTAAGTCA
ATTCGTGCAG GGAAAGTAAA CCTTCAAGAT GGTTATGCTT TGCTTCGAGA TGGTGAAATA
TGGCTAATTA ATGCCCATAT CTCTCCCTAT AACGCTAGTG GGCAGTATTT CAATCATGAA
CCAAGACGGA CGCGCAAGCT GTTATTACAC CGTCAAGAAA TTCGGAAGCT GATTGGCAAG
GTAGAGCAGC AGGGCTTAAC ATTAGTTCCC TTGAAAATGT ACCTCAAACG TGGCTGGGTC
AAAGTTAGTA TTGCTCTCGG TAAGGGGAAA AAGCTCCACG ATAAGCGAGA AAGCCTGAAA
CGTCGCCAAG ACCAGCGTGA TATTCAACGA GCAATGAAAA ATTATTAG
|
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| Protein sequence | MSDKSESYKV ITDNRQARYL YEILETFEAG IQLTGTEVKS IRAGKVNLQD GYALLRDGEI
WLINAHISPY NASGQYFNHE PRRTRKLLLH RQEIRKLIGK VEQQGLTLVP LKMYLKRGWV
KVSIALGKGK KLHDKRESLK RRQDQRDIQR AMKNY
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