Gene Ava_2316 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_2316 
Symbol 
ID3683586 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp2877284 
End bp2878390 
Gene Length1107 bp 
Protein Length368 aa 
Translation table11 
GC content42% 
IMG OID637717661 
Productpeptidyl-prolyl cis-trans isomerase, cyclophilin type 
Protein accessionYP_322829 
Protein GI75908533 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0652] Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTGAATT TATTTAAATC CTGGCTGAAG AACAGCCTCA TGGCAATACT GTTAGTAACA 
ATATTTTTAG GCATAAATAC AGCTGGCTGG ACTCCTTCCA GTAACGCCGC CTTGCCATCT
GGAAATGCGA TTACTGACGG TAGAGCTTTA TTGCGGTATG CACTCCCAAT AAATAATAAG
CCGGTACGCG AACTGCAAGC CAGTTTAGAA GATATTTCTG CCCAACTGCG TGCAAATCGC
CGATGGGGTG CTGTCTCCAA AGACCTGAGT AAAGCATCCC GCATTCTTGA TAAACCTTCA
CAAATCCTAA CAAGCGTTCC GGAAGAACGC CAAACTCAAG CTGAAACTTG GATTAATGAA
TTAAAAACTG GTGTAGCAAA AGTTCAAGAA ATTGCACAAT CCAAAGATAA AGAACAAGTT
CTACTAGAGA GAGCTAAATT ACTTAATTTA GTCTCTCTTA TAGAAGAATC AATGGTGAAG
GAATTTCCTT TTGAAGTTCC AGAAGAGTAT ATTAACCTCC CTCAACTTAA AGGACGCGCC
ACCATAGCGA TTAAAACCAA CAAAGGTGAT TTAACTGTTG TGGTTGATGG TTACAGCGCC
CCTGTAACGG CGGGAAACTT TGTAGATTTA GTGCAACGGG GTTTCTATAA TGGGTTAGAA
TTTACCCGTT CTGAAGAATC TTACGTTCTA CAAACCGGAG ATCCCCCAGG CAAAGAACAG
GGTTTTATTG ATCCCAAAAC AGGCAAATAT CGGGCTATCC CTCTAGAAAT TCTGGTAGAA
GGTGATAAAA AACCAACTTA CGGGATCACC TTAGAAGACG CTGGACGCTA TCTAGATATG
CCAGTATTAC CCTTTTCTTC CTTTGGTGCA TTAGCAATGG CTCGTCCTGA AACCGAAGCC
GATGGTGCGT CTTCCCAAGT CTTCTTCTTC TTATTTGAAC CAGAACTCAC CCCAGCCGGA
CGTAACCTCT TAGATGGTCG TTACTCAGTT TTTGGCTATC TCATAGAAGG CAGAGACATT
TTAGATACAC TAAAAGCCGG TGACAAAATC GAATCAGCAA CCGTTGTTCA GGGACTAGAC
AATTTAGTAC AACCCCAATC AGCCTAA
 
Protein sequence
MLNLFKSWLK NSLMAILLVT IFLGINTAGW TPSSNAALPS GNAITDGRAL LRYALPINNK 
PVRELQASLE DISAQLRANR RWGAVSKDLS KASRILDKPS QILTSVPEER QTQAETWINE
LKTGVAKVQE IAQSKDKEQV LLERAKLLNL VSLIEESMVK EFPFEVPEEY INLPQLKGRA
TIAIKTNKGD LTVVVDGYSA PVTAGNFVDL VQRGFYNGLE FTRSEESYVL QTGDPPGKEQ
GFIDPKTGKY RAIPLEILVE GDKKPTYGIT LEDAGRYLDM PVLPFSSFGA LAMARPETEA
DGASSQVFFF LFEPELTPAG RNLLDGRYSV FGYLIEGRDI LDTLKAGDKI ESATVVQGLD
NLVQPQSA