Gene Ava_2298 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_2298 
Symbol 
ID3678906 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp2855669 
End bp2857117 
Gene Length1449 bp 
Protein Length482 aa 
Translation table11 
GC content49% 
IMG OID637717643 
ProductF0F1 ATP synthase subunit beta 
Protein accessionYP_322811 
Protein GI75908515 
COG category[C] Energy production and conversion 
COG ID[COG0055] F0F1-type ATP synthase, beta subunit 
TIGRFAM ID[TIGR01039] ATP synthase, F1 beta subunit 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTCACCA CCGCAGAAAA AACAAACATC GGTTACATTA CCCAAATCAT TGGTCCGGTT 
GTAGACGTTA AATTCCCTAG CGGAAAATTA CCGCAAATCT ACAACGCTCT GACCATCAAA
GGCACTAACG AAGCTGGACA GGAACTCAAC CTCACCGTAG AAGTACAGCA ACTTTTGGGC
GACAACCAAA TACGCGCCGT TGCTATGAGT TCCACGGATG GTTTAGTCCG TGGTCTGGAA
GTCGTCGATA CAGGCGCGCC CATCAGCGTA CCCGTTGGTA AAGCAACTCT CGGACGGATT
TTCAACGTTC TTGGCGAACC TGTAGACAAT AGAGGCCCAG TTAACAACCA AGAAACTTTA
CCCATCCACC GTCCGGCTCC CAAGCTCACA GAGCTAGAAA CCAAGCCTTC CGTTTTCGAG
ACCGGGATTA AAGTTGTTGA CCTCCTGACC CCTTATCGAC GCGGTGGTAA AATTGGTCTG
TTCGGCGGTG CTGGTGTCGG CAAAACCGTA ATCATGATGG AGCTGATTAA CAACATTGCT
ACCCAGCACG GTGGCGTGTC TGTATTCGCC GGCGTGGGAG AGCGTACCCG TGAAGGGAAT
GACCTCTACA ACGAAATGAT TGAATCTGGG GTAATCAACA AAGACAACCT CAACGAATCA
AAAATCGCGT TGGTGTACGG TCAAATGAAC GAACCACCCG GAGCAAGAAT GCGGGTTGGT
TTGTCTGGTT TGACAATGGC TGAATACTTC CGTGATGTCA ATAAGCAAGA CGTACTGTTG
TTTATTGACA ACATTTTCCG GTTCGTACAA GCAGGTTCTG AAGTATCCGC GCTGTTGGGT
CGGATGCCTT CTGCTGTGGG ATATCAGCCA ACTTTGGGTA CTGATGTAGG TCAATTGCAA
GAACGGATTA CCTCCACTAC CGAAGGTTCT ATCACCTCAA TTCAAGCTGT GTACGTACCT
GCGGACGACT TGACAGACCC CGCGCCTGCA ACTACCTTTG CTCACTTAGA TGGTACAACA
GTACTATCTC GTGGTTTGGC TGCTAAAGGT ATTTATCCTG CGGTAGATCC GCTAGGTTCC
ACCTCTACCA TGTTGCAACC TAACATTGTT GGTGACGAAC ACTACAATAC TGCTCGTGCT
GTCCAATCGA CCCTGCAACG CTACAAAGAA TTGCAAGACA TCATCGCTAT TCTGGGTCTA
GATGAACTGT CTGAAGAAGA CAGACTCATC GTAGCACGGG CCCGGAAAGT TGAGCGTTTC
TTGTCTCAGC CCTTCTTCGT CGCTGAAGTA TTCACAGGTT CTCCTGGTAA GTACGTGAAG
TTAGAAGACA CCATCAAAGG GTTCCAGAAG ATTCTATCTG GTGAGTTGGA TGATCTGCCA
GAGCAAGCCT TCTACTTGGT AGGCGACATC AACGAAGCGA TCGCCAAAGC CGAAAAACTC
AAAGGCTAA
 
Protein sequence
MVTTAEKTNI GYITQIIGPV VDVKFPSGKL PQIYNALTIK GTNEAGQELN LTVEVQQLLG 
DNQIRAVAMS STDGLVRGLE VVDTGAPISV PVGKATLGRI FNVLGEPVDN RGPVNNQETL
PIHRPAPKLT ELETKPSVFE TGIKVVDLLT PYRRGGKIGL FGGAGVGKTV IMMELINNIA
TQHGGVSVFA GVGERTREGN DLYNEMIESG VINKDNLNES KIALVYGQMN EPPGARMRVG
LSGLTMAEYF RDVNKQDVLL FIDNIFRFVQ AGSEVSALLG RMPSAVGYQP TLGTDVGQLQ
ERITSTTEGS ITSIQAVYVP ADDLTDPAPA TTFAHLDGTT VLSRGLAAKG IYPAVDPLGS
TSTMLQPNIV GDEHYNTARA VQSTLQRYKE LQDIIAILGL DELSEEDRLI VARARKVERF
LSQPFFVAEV FTGSPGKYVK LEDTIKGFQK ILSGELDDLP EQAFYLVGDI NEAIAKAEKL
KG