| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ava_2288 |
|---|
| Symbol | |
|---|
| ID | 3678955 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Anabaena variabilis ATCC 29413 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007413 |
|---|
| Strand | + |
|---|
| Start bp | 2845631 |
|---|
| End bp | 2846521 |
|---|
| Gene Length | 891 bp |
|---|
| Protein Length | 296 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 41% |
|---|
| IMG OID | 637717633 |
|---|
| Product | Alpha/beta hydrolase fold |
|---|
| Protein accession | YP_322801 |
|---|
| Protein GI | 75908505 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 0.906188 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTTCAGT TTCAACCGCC TGGCTTTGGT CATAAAGTCG TCCACACATC TTTGGGCGCA
ATGGTTTACT ATACCCAAAC TGCTGCACCT TGGTGGGATG ATGACTCTGA AGATTTACCA
CCCCTATTGT TTCTTCATAA TTTTGGCGGG GGAGCGTCTG CTTACGAATG GTCTAAAGTC
TATCCGGCTT TTGCATCTAC ACACCGCATT CTTGCACCTG ATTTGATTGG CTGGGGAGAA
TCCGCACATC CAGTCAGGGA TTATGAGATT AGAGACTATC TTACAGCGAT CGCGGAATTT
ATCAGCCAAA CTTGTCAGCA ACCAGTCAAG GTAGTCGCGT CTTCCTTAAC GGCTGCTTTC
ACTATCCGTT TAGCAATTAC TCAGCCCGAC CTGTTTGACT CACTCTATTT GGTCTGTCCT
TCTGGATTTG ATGATTTTGG TCAAGGTGCT GGTCGTAGAT TACCACTACC GATAATTAAT
GCACCTTTAT TAGATAATCT TATTTATGCC TTGGGCGCAG AAAATGAAAT TGCTGTGAGG
AATTTTCTGC AAAGTTTTTT ATTCGCTCAA CCACAACGGG TTTCGCAGGA AATGGTAGAC
GCTTATTTAT ATTCTGCACA ACAACCCAAT GCCAAGTTTG CTGCATTATC TTTTTTAAAA
GGCGACCTTT ACTTTGACTT GAGTTTATAC ATTCAACAAT TGATAACTCC CACAGTTATC
TTTTGGGGAG AAAAGGCACA ATTCACCAGG ATTGAATTAG GACAACGCTT GGCTAATTTA
AATCCTCATA TAATTAGAAA ATTTTATGCG ATCGCCGACA CAGGAATATT ACCCCATTTA
GAACAACCAG AAATAATTAT CGGCTTATTG CAACCATATG TAAAAGTATG A
|
|---|
| Protein sequence | MLQFQPPGFG HKVVHTSLGA MVYYTQTAAP WWDDDSEDLP PLLFLHNFGG GASAYEWSKV
YPAFASTHRI LAPDLIGWGE SAHPVRDYEI RDYLTAIAEF ISQTCQQPVK VVASSLTAAF
TIRLAITQPD LFDSLYLVCP SGFDDFGQGA GRRLPLPIIN APLLDNLIYA LGAENEIAVR
NFLQSFLFAQ PQRVSQEMVD AYLYSAQQPN AKFAALSFLK GDLYFDLSLY IQQLITPTVI
FWGEKAQFTR IELGQRLANL NPHIIRKFYA IADTGILPHL EQPEIIIGLL QPYVKV
|
|---|
| |