| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ava_2282 |
|---|
| Symbol | |
|---|
| ID | 3678949 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Anabaena variabilis ATCC 29413 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007413 |
|---|
| Strand | + |
|---|
| Start bp | 2837891 |
|---|
| End bp | 2838841 |
|---|
| Gene Length | 951 bp |
|---|
| Protein Length | 316 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 35% |
|---|
| IMG OID | 637717627 |
|---|
| Product | LysR family transcriptional regulator |
|---|
| Protein accession | YP_322795 |
|---|
| Protein GI | 75908499 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0583] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACAGTT ACCTAGATTT AATCCACAGA GATAGTCTTT TAAATTCCTT AAGCCTAGAG
CATCTGAGAA TTTTTGAGGC GATCGCGCGA CATAAAAGTT TCACCCGTGC AGCCGAAGAA
TTGTTCACTA CCCAGCCTTC TGTCTCACGT CATATTAAAC AATTAACGGA AACAATTGGT
TTGCCTCTAT TTAAATATGT AGATAACTGC ATTCAACTGA CACCAACAGG GGAAGAATTA
TTAGTTATTT ACCAGGAAAT ATTTCAGTAT TTAGAAAATT TTGATACAAA ATTAGTTGAT
TTGAAAGATA GCAATCAAGG CTGTTTAAAA GTCTCGGCTG TAACGACCAG CAAGTATGTT
ATTACTAATT TGTTGCAACC ATTTTGCAAA CTTTATCCTG ATATTAGAAT TGCCCTTGAG
TTTACAAATC ATGAAGTCAT CTTAACCAGA ATACAAGAAA ATGCAGATGA CTTTTATATC
CTGGGGTATC CACCAAAAAA AGAAGATATT GAAATCAAGC CATTTCTGGA TAATCCTTTA
GTGGTAGTTG CTCCATCAAA TCATCCTTTT GTTAAGCAAT CATCTATTTC TTTGGAACGT
TTAGCTAAAG AACAATTAAT CATGCGAGAA AGAGGCTCGG AAACTCGTAT GGCTGTAGAA
ATGTTATTTG CTGAACGGGG AATCAGAATG CCGGTTAAAT TAGAGGTAAG TAGTAATAAT
GCAACTAAAC AAGCAGTAAT TGAAGGTTTA GGTCTAGCAG TTTTATCAAT ACATACCTTA
TATCCTGAAT TACAACGAAA TCAGCTATCA ATCTTAAATG TAAAGGGGTT TCCTATTCTT
CAACAATGGC AAATAGCTTA CCCGAAGAAA AAATGGCTAT CTCCTATTGT GAGTACTTTT
TTAGAGTACT TACTAACAGA AGGAGTCAGA ACTAAAAGTG AGAATTTTTG A
|
|---|
| Protein sequence | MNSYLDLIHR DSLLNSLSLE HLRIFEAIAR HKSFTRAAEE LFTTQPSVSR HIKQLTETIG
LPLFKYVDNC IQLTPTGEEL LVIYQEIFQY LENFDTKLVD LKDSNQGCLK VSAVTTSKYV
ITNLLQPFCK LYPDIRIALE FTNHEVILTR IQENADDFYI LGYPPKKEDI EIKPFLDNPL
VVVAPSNHPF VKQSSISLER LAKEQLIMRE RGSETRMAVE MLFAERGIRM PVKLEVSSNN
ATKQAVIEGL GLAVLSIHTL YPELQRNQLS ILNVKGFPIL QQWQIAYPKK KWLSPIVSTF
LEYLLTEGVR TKSENF
|
|---|
| |