| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ava_2250 |
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| Symbol | |
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| ID | 3679324 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Anabaena variabilis ATCC 29413 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007413 |
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| Strand | + |
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| Start bp | 2800579 |
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| End bp | 2801736 |
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| Gene Length | 1158 bp |
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| Protein Length | 385 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 637717592 |
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| Product | DevC protein |
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| Protein accession | YP_322763 |
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| Protein GI | 75908467 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0577] ABC-type antimicrobial peptide transport system, permease component |
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| TIGRFAM ID | [TIGR01185] DevC protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.0130513 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAAAAGAA AAATTCCTTT AGCATGGTTG CAATTATCGC GGGAAAAGGC ACGGATGTTA
GTAGCGATCG CCGGTATTGC TTTTGCAGAT GTGCTGATGT TTTTACAACT TGGTATCCGC
GAGGCTTTGT TTGATGGTGC TGTGCAACTA CACAACAGCT TGGAAGGTGA GATTGTGCTG
GTGAGTAGTC GTTACAAATC CTTATTTTCA CAGCAGCGTT TTTCCCAACG CAGACTTTAT
CAAGCAATGG GTTTTACTGG CGTGCAATCA GTCAGTCCCA TCTATGTCGA TCCTCTTCCT
TGGAAAAACC CTGACAATCA AGAAACTTGT AATATTTATG TTATTGCTTT TAATCCTGAA
GAAAAAGTAC TTAATTTAGC TGGTGTACAA GAGAATTTAA CTAAATTAAG AGAACCTGAT
ACTGTGCTGT TTGATTTAGG TTCTCGCAAA GAATTTGGTC AAATTGTTCC CAAATTTCAA
ACTCGTGGCA CTTTCACCAC AGAAATTAAT AATCGTCAAA TTAAAACTGT TGGCTTATTT
AAATTAGGAA CTTCCTTTGG CATTAATGGC AACCTCATCA CTAGCGATGT GAATTTTTTT
CGCCTCTTTA ATCAAAGACG GCAACCAGGA CTAATTGACT TAGGTTTGAT TAAGTTAGAA
CCAGGAGCAA ATATAAATTG GGTATTAGCT AACTTAAAAG CTAATCTTCC TGATGATATA
AATATTTTAA CAAAACAAGA GTTTGCCAAC CAAGAAAGAA GCTATTGGAA CAGTAGCACA
CCCGTAGGTT TTACATTTAC GTTAGGTGCA ATAATTGGCT TCATGGTAGG TGCAGTTATT
GTTTATCAAA TTCTCTATAG TGATGTTTCT GATCACCTAC CAGAATACGC AACATTAAAA
GCTATAGGCT TCAAAAATCG CTACTTACTC ATAATTGTTT TTCAAGAAGC TTTGATTTTA
GCCGCTATTG GCTTTATTCC TGGCATTGCC ATTTCCCAAG GTTTGTATAT GATTACGCGC
CAAGCAACAC TCCTCCCCAT CATGATGACA CTAGATCGGG CAGTATTTAT ATTTATGATC
ACAACTTTGA TGTGTTCAAT TTCTGCCTCA CTAGCCATCA GAAAATTACA AGCTGCTGAT
CCGGCTGATA TTTTCTAA
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| Protein sequence | MKRKIPLAWL QLSREKARML VAIAGIAFAD VLMFLQLGIR EALFDGAVQL HNSLEGEIVL
VSSRYKSLFS QQRFSQRRLY QAMGFTGVQS VSPIYVDPLP WKNPDNQETC NIYVIAFNPE
EKVLNLAGVQ ENLTKLREPD TVLFDLGSRK EFGQIVPKFQ TRGTFTTEIN NRQIKTVGLF
KLGTSFGING NLITSDVNFF RLFNQRRQPG LIDLGLIKLE PGANINWVLA NLKANLPDDI
NILTKQEFAN QERSYWNSST PVGFTFTLGA IIGFMVGAVI VYQILYSDVS DHLPEYATLK
AIGFKNRYLL IIVFQEALIL AAIGFIPGIA ISQGLYMITR QATLLPIMMT LDRAVFIFMI
TTLMCSISAS LAIRKLQAAD PADIF
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