| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ava_2249 |
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| Symbol | |
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| ID | 3679323 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Anabaena variabilis ATCC 29413 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007413 |
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| Strand | + |
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| Start bp | 2799363 |
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| End bp | 2800562 |
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| Gene Length | 1200 bp |
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| Protein Length | 399 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 637717591 |
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| Product | secretion protein HlyD |
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| Protein accession | YP_322762 |
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| Protein GI | 75908466 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1566] Multidrug resistance efflux pump |
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| TIGRFAM ID | [TIGR02971] ABC exporter membrane fusion protein, DevB family |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.0210413 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAAAACC TCTATCCAGA CCGATTTAGG AATCTCAGTT ATCCTAATAG AAAGCTCATT
TTCGGTATAG TTGCCATAGC GTTAGCAAGC GCAGCTGGTT CGCTGTATTT AGCCTCTGGC
TTAGGAAATT CGGGGAAAGA AGTTACCCCA TTGGTAATTG ATCAGCGTCC TCCAATCAAG
GCTATTACTG CTTTAGGGAG GATAGAACCC CAAGGTGAAG TTGTACAGGT GTCAGTTTCC
CAGACTGCTG GTAGTAACCG CATAGCAGAA TTGTTGGTAA AACAAGGCGA TCGCATCAAC
AAGGGACAAA TAATTGCTAT CCTAGATAAC CGTGATACTC GACTAGCGGC TTTAAATAGA
GCCAAACAAC AAGTTGCAGT TGCACAATCG CAACTAGCAC AGGTAAAAGC TGGAGCCAAA
CAGGGAGAAA TTGCTGCTCA ACAAGCCATA ATTGCAGAAT TAGCAGCAGA ACTACGCCAA
GAAGTTGCAG CCAGAGTGGC GACGGTGAGA CGCTTAGAAG CAGAAGTGAG AAATGCTCAA
GTTGAATATC AGCGCTATCA ATCGCTGCAA GCAGATGGCG CGGTTTCTGT ATCTATGAGA
GATAGTAAAA AACTAACTCT AGAAACCACC GAGGAAAGTT TACGGGAAGC CTTAGCCAAC
CGCAGCCAAA CATCAGAAAC TGTGCAAGAA AGACTTAGAC AAGCAAAAGC CACCTTAAAC
CGAATTGCAG AGGTGCGTCC TACAGATGTG CAAGCAGCAC AAGCAGAAGT AGAAAGTGCC
AAAGCCGCAG TTCAAGAAGC CCAAGCTAAT TTAGACTTGA CTTATGTAAA GTCGCCTAAA
GCTGGTCAAA TCCTGAAAAC TCATACCTTA GCTGGGGAAG TAGTCAGTGA CAAAGGTATT
GTGGAAATCG GACAGACTAA TCAAATGTAT GTAGTTGCAG AAGTGTATGA AGTTGATATC
AACCGCGTCA AAGTTGGACA ACGCGCAACT GTAACTCAAC TCAACCTACC CGGAGAATTG
ACAGGAACCG TCGAGGATAT TGGCTTACTA ATTGCCAAAA AAGACGTACT CAACACCGAT
CCAGCCGCCG ATATCGATGC ACGAGTAGTA GAAGTCAAAA TCCGCCTCAA CCCCGAATCT
AGCCAGCGAG TCACAGGTTT AACTAACTCC AAAGTCAAAG TAGCGATCGC CTTAAATTGA
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| Protein sequence | MQNLYPDRFR NLSYPNRKLI FGIVAIALAS AAGSLYLASG LGNSGKEVTP LVIDQRPPIK
AITALGRIEP QGEVVQVSVS QTAGSNRIAE LLVKQGDRIN KGQIIAILDN RDTRLAALNR
AKQQVAVAQS QLAQVKAGAK QGEIAAQQAI IAELAAELRQ EVAARVATVR RLEAEVRNAQ
VEYQRYQSLQ ADGAVSVSMR DSKKLTLETT EESLREALAN RSQTSETVQE RLRQAKATLN
RIAEVRPTDV QAAQAEVESA KAAVQEAQAN LDLTYVKSPK AGQILKTHTL AGEVVSDKGI
VEIGQTNQMY VVAEVYEVDI NRVKVGQRAT VTQLNLPGEL TGTVEDIGLL IAKKDVLNTD
PAADIDARVV EVKIRLNPES SQRVTGLTNS KVKVAIALN
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