| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ava_2183 |
|---|
| Symbol | |
|---|
| ID | 3679739 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Anabaena variabilis ATCC 29413 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007413 |
|---|
| Strand | + |
|---|
| Start bp | 2700119 |
|---|
| End bp | 2704792 |
|---|
| Gene Length | 4674 bp |
|---|
| Protein Length | 1557 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 637717526 |
|---|
| Product | peptidase C14, caspase catalytic subunit p20 |
|---|
| Protein accession | YP_322698 |
|---|
| Protein GI | 75908402 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2319] FOG: WD40 repeat |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.150849 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGTAGAG ATGCTTTAGT TGTTGGCATT AATAAGTATA GTTTTGCAGG CTTGTCAGGT
TTAAAATCGC CTGCTAAGGA TGCAGAAGCG ATCGCCAAGC GACTTAGTGA AGCTGGAAAT
TTTCATGTCA AGCGATCGCC ACAATTCTTA GATCCGTTTG AAGATCATGC ACCACGGGTA
GCAGCAAATC AAGAACTCAA GCTGGCAGAC TTAGAAAAGG CTTTAGAAGA ATTATTTTAT
CCTGAAGGCA GGAGCATCCC AGATACCGCG CTGTTTTATT TCTCTGGGCA TGGTCTTCGT
AAAGAGGGAC GCATTAAGGA AGGATATCTG GCAACCAGTG ATACAAATCC TGATGTGGGC
AACTGGGGAC TGCGATTAAA GTGGCTGCGG GAATTATTGC AAGAAAGCCC AGTAAGACAG
CAGATTATCT GGTTGGACTG TTGTTACAGT GGTGAACTAC TCAATTTTAC AGAAGCTGAC
CCAGGCGATC GCGGCAATAC ACGCGATCGC TGTTTTATTG CTGCTTCCAG AGAATTTGAG
CCAGCCTATG AAAATGTTGG TGGAGCCAGT AGCCTACTGA CAAGCGCAAT TTTGCGCGGA
TTTGATTTGG CTGATGTATC TAACCAATGG GTGACGAACG AAACATTAGT GGCATTCTTG
CGAGAAGAAT TAAAAACAGC ACCCCAAAAA TTCATTTCTA ATAACCTGGG GTGTATTAAT
ATTATTTTCA GAGCAGAAAC AACAAAAAAA CAAGCTGTTC AACCTGTTAC ACCAACTGCC
AATCAACCAA ACCAAACGGC TAAATTAGCA GAACAGTTAC GAGCTTGGTT TACTGCCTTA
CGTTATGACT TTGAACAGTA TGAAATTAAC AATGAAACTT ATTTTGAGTG GATTATTAAT
GTAATTAATC CTGTAGGACG CAAGCGGTAT AACCGAATTT TGGTACGCGG CATCACTGGA
GAAGCCGAAA TGAAAGATGT TGCCGCCTTG CGACAGTCAG TCAATGCTCA AAGAACCGAT
ATAGGTTGGC TCATTACAAA CCGCCGTGTC AGTCGGGCTG CTAAAGATGA GGTGAGCAAG
CAAGAAAACC AGGATTTGTT CTGCTACACC CTTGATGAGT TGCTGGATCG AGATGCAGAT
TTTAGTTGCT ATCTCAACTG GTTGGAAGAT GAAATTAAGC AACGGGGAAT TGACCGCACC
TATGTACCCC TAGCTTGTAC CAAAGAGGAA TTTGATCCCA TCTCAAAGCA GAAAATGGGG
ATGAGCCGTT ACGCCCAAGC TGATGGTTGG ATTGATGGTT ATGTTGATCG CTGGCTTGAT
GATCCTGCTA AAGAACACCT TTCCATTCTG GGTGAATTTG GTACTGGTAA AACTTGGTTT
GGGTTGCATT ATGCCTGGAC TACCCTGCAA CGCTATCGTG ATGCTCAACG CCGGGGTGTA
GAACGTCCAC GTCTGCCGTT AGTGATTCCT TTACGGGATT ATGCCAAAGC AGTGAGTGTA
GAATCACTGT TTTCGGAGTT TTTTTTTCGT AAGCATGAAA TCCCTCTGCC TGGTTATTCT
GCTTTTGAAC AACTCAACCG CATGGGTAAA GTGCTGTTGA TTTTCGATGG CTTTGATGAA
ATGGCAGCTA GGGTAAATCG CCAAGAGATG ATCAACAACT TCTGGGAACT AGCCAAAGTA
GTAGTACCAG GAGCAAAGGT AATTCTGACT TGTCGAACTG AACATTTCCC CGAAGCAAAA
GAAGGCAGAG CTTTGCTAAG TGCCGAGTTG CAAGCTTCTA CTATTAACTT GCCTCTAGAA
ACACCGCGCT TTGAAGTGCT GGAATTAGAA AAATTTGATG ACGAGCAAAT TCGGCAGGTA
TTTGGGTTTC GTGCTGAAGC AGAGACTGTG GAACAGGTAA TGAATAATTC GACACTGCGG
GATTTGGCAC GTCGTCCCGT AATGACAGAA CTGATTATAG AAGCTTTGCC AGAAATTGAG
GCGGGTAAGC CAGTTGATAT ATCACGGGTA TATTTATATG CTGTGCGCCA CAAGATGGAA
AGGGATATCA AAGCCGAGCG TACCTTTACC TCATTAGCAG ATAAACTCTA TTTTTTGTGT
GAACTGTCGT GGGAAATGCT CTCACAAGAC CAGATGAGCA TGAACTACAA AGAATTTCCA
GACCAGATTC GGCGTTTATT TGGTTCTGTA GTCGAGGAAG AAAAGGATTT AGACCACTGG
CATTATGACA TGATGGGGCA GACAATGCTG ATTCGTAATG CGGAAGGTGA CTACAGCCCA
GCCCATCGTT CATTATTAGA GTTTTTTGCC GCCTATAAGC TGGTGGCAGA GTTAGGTGTT
TTAGCCCCCG ACTTCACAGA ACTGGCTCAA GCACAGTCTT GTTTAGACAA AACTGTTCCA
GCAAGAGATT ACACTTGGTC AGAATACTTT CAGCGACAGT GCCAAGAAGA TGGACAACTG
CTACCCATAG CACCCATAAA GTCATTTACC AACGCATCTT TAGAGAGGTT ATGTAATTAT
TTGGGTACGT CGCCTTTGGC AAAAGCTTTG CTGGATTTAG CTGTGCCAAT GTTAGATGAG
CAGGTTTTTC AACAAATTTT ATTGAGGCTG ATTCAAGCAA CCCGTGGTAA AACTCAGGCT
CAGGTGGGTT ATATAGGCGG CAACTTAGTG AAATTACTAA TAGAAAGAAA TCCTTACAGC
CTGGAAAATT GTGATCTCAG TAATACTGTA ATTCCGGATG TAAACTTTGC AAATGCCAGC
TTCCGGTGGG TAAATTTGAT GGGAACGAAT CTCACAAACT CTGTTTTTGC ACCAGTTCTG
GGAGTGGTCT ATTCAGTGGC ATTTAGTCCA GATGGCAAAA AATTGGTGAT TGGAGATAGT
AAGGGTACTA TACAGGTCTG GGAAACATTT TCTGGCAGGG TTTTGTTGTT TCTTCAAGGA
CATGAAAATG GGGTCAAATC AGTGGCGTTT TCCCCCGACG GTGGGCGCAT TGTCAGTGGC
AGTAATGACA ACACAATCCG GTTGTGGGAT GTGAATGGTC AGCCCATTGG TCAACCCTTC
CGGGGGCATG AAGGAGGGGT CAATTCAGTA GCGTTTTCCC CCGACGGTGG GCGCATTGTC
AGTGGCAGTA ATGACAACAC AATCCGGTTG TGGGATGTGA ATGGTCAGCC CATTGGTCAA
CCCTTCCGGG GGCATGAAGG AGGGGTCAAT TCAGTAGCGT TTTCCCCCGA CGGTGGGCGC
ATTGTCAGTG GCAGTAATGA CAACACAATC CGGTTGTGGG ATGTGAATGG TCAGCCCATT
GGTCAACCCT TCCGGGGGCA TGAAGGAGGG GTCAATTCAG TAGCGTTTTC CCCCGACGGT
GGGCGCATTG TCAGTGGCAG TTATGACAAC ACAGTACGGT TGTGGGATGT GAATGGTCAG
CCCATTGGTC AACCCTTCCG GGGGCATGAA GGAGGGGTCA ATTCAGTGGC GTTTTCCCCC
GACGGTGGGC GCATTGTCAG TGGCAGTAAT GACAACACAA TCCGGTTGTG GGATATGAAT
GGTCAGCCCA TTGGTCAACC CTTCCGGGGG CATGAAGATA TGGTCTATTC AGTGGCGTTT
TCCCCCGACG GTGGGCGCAT TGTCAGTGGC AGTTATGACA AGACAATACG GTTGTGGGAT
ATGAATGGTC AGCCCATTGG TCAACCCTTC CGGGGGCATG AAGATATGGT CTTATCAGTG
GCGTTTTCCC CCGACGGTGG GCGCATTGTC AGTGGCAGTT ATGACAACAC AGTACGGTTG
TGGGAGGCGA ATGGTCAGTC CATTGGTCAA CCCTTCCGGG GGCATGAAAA TTTGGTCAAT
TCAGTAGCGT TTTCCCCCGA CGGTGGGCGC ATTGTCAGTG GCAGTAATGA CAACACAATC
CGGTTGTGGG ATGTGAATGG TCAGCCCATT GGTCAACCCT TCCGGGGGCA TGAAGGAAGG
GTCTATTCAG TGGCGTTTTC CCCCGACGGT GGGCGCATTG TCAGTGGCAG TAATGACAAC
ACAATCCGGT TGTGGGATGT GAATGGTCAG CCCATTGGTC AACCCTTCCG GGGGCATGAA
AATTTGGTCT ATTCAGTGGC GTTTTCCCCC GACGGTGGGC GCATTGTCAG TGGCAGTTGG
GACAACACAA TACGGTTGTG GGATGTGAAT GGTCAGCCCA TTGGTCGACC CTTCCGGGGT
CATGAAAATG TGGTCTATTC AGTGGCGTTT TCCCCGGATG GTGGGCGCAT TGTCAGTGGC
AGTTGGGACA ACACAATACG GTTGTGGGAT GTGAATGGTC AGTCCATTGG TCAACCCTTC
CGGGGGCATG AAGATTGGGT CAGATCAGTG GCGTTTTCCC CCGACGGTGG GCGTATTGTC
AGTGGCAGTG ATGACAAGAC ACTCAGGTTG TGGGATGTGA ATGGTCAGCC CATTGGTCAA
CCCTTCCGGG GGCATGAAGA TTTGGTCAGA TCAGTGGCGT TTTCCCCCGA CGGTGAGCGC
ATTGTCAGTG GCAGTTATGA TGAAACCATC CGTATTTGGG ATGCAGCTAC TGGTGATTGT
CTGCGGGTAA TCAGCTATAA ACTTTGTGCA GGGCTGAATA TTACAGGTGT AACAGGGCTA
ACGTCAGCAC AGCGCGTAGC ATTAAAACTA ATGGGAGCGA TTGATAATTT ATGA
|
|---|
| Protein sequence | MSRDALVVGI NKYSFAGLSG LKSPAKDAEA IAKRLSEAGN FHVKRSPQFL DPFEDHAPRV
AANQELKLAD LEKALEELFY PEGRSIPDTA LFYFSGHGLR KEGRIKEGYL ATSDTNPDVG
NWGLRLKWLR ELLQESPVRQ QIIWLDCCYS GELLNFTEAD PGDRGNTRDR CFIAASREFE
PAYENVGGAS SLLTSAILRG FDLADVSNQW VTNETLVAFL REELKTAPQK FISNNLGCIN
IIFRAETTKK QAVQPVTPTA NQPNQTAKLA EQLRAWFTAL RYDFEQYEIN NETYFEWIIN
VINPVGRKRY NRILVRGITG EAEMKDVAAL RQSVNAQRTD IGWLITNRRV SRAAKDEVSK
QENQDLFCYT LDELLDRDAD FSCYLNWLED EIKQRGIDRT YVPLACTKEE FDPISKQKMG
MSRYAQADGW IDGYVDRWLD DPAKEHLSIL GEFGTGKTWF GLHYAWTTLQ RYRDAQRRGV
ERPRLPLVIP LRDYAKAVSV ESLFSEFFFR KHEIPLPGYS AFEQLNRMGK VLLIFDGFDE
MAARVNRQEM INNFWELAKV VVPGAKVILT CRTEHFPEAK EGRALLSAEL QASTINLPLE
TPRFEVLELE KFDDEQIRQV FGFRAEAETV EQVMNNSTLR DLARRPVMTE LIIEALPEIE
AGKPVDISRV YLYAVRHKME RDIKAERTFT SLADKLYFLC ELSWEMLSQD QMSMNYKEFP
DQIRRLFGSV VEEEKDLDHW HYDMMGQTML IRNAEGDYSP AHRSLLEFFA AYKLVAELGV
LAPDFTELAQ AQSCLDKTVP ARDYTWSEYF QRQCQEDGQL LPIAPIKSFT NASLERLCNY
LGTSPLAKAL LDLAVPMLDE QVFQQILLRL IQATRGKTQA QVGYIGGNLV KLLIERNPYS
LENCDLSNTV IPDVNFANAS FRWVNLMGTN LTNSVFAPVL GVVYSVAFSP DGKKLVIGDS
KGTIQVWETF SGRVLLFLQG HENGVKSVAF SPDGGRIVSG SNDNTIRLWD VNGQPIGQPF
RGHEGGVNSV AFSPDGGRIV SGSNDNTIRL WDVNGQPIGQ PFRGHEGGVN SVAFSPDGGR
IVSGSNDNTI RLWDVNGQPI GQPFRGHEGG VNSVAFSPDG GRIVSGSYDN TVRLWDVNGQ
PIGQPFRGHE GGVNSVAFSP DGGRIVSGSN DNTIRLWDMN GQPIGQPFRG HEDMVYSVAF
SPDGGRIVSG SYDKTIRLWD MNGQPIGQPF RGHEDMVLSV AFSPDGGRIV SGSYDNTVRL
WEANGQSIGQ PFRGHENLVN SVAFSPDGGR IVSGSNDNTI RLWDVNGQPI GQPFRGHEGR
VYSVAFSPDG GRIVSGSNDN TIRLWDVNGQ PIGQPFRGHE NLVYSVAFSP DGGRIVSGSW
DNTIRLWDVN GQPIGRPFRG HENVVYSVAF SPDGGRIVSG SWDNTIRLWD VNGQSIGQPF
RGHEDWVRSV AFSPDGGRIV SGSDDKTLRL WDVNGQPIGQ PFRGHEDLVR SVAFSPDGER
IVSGSYDETI RIWDAATGDC LRVISYKLCA GLNITGVTGL TSAQRVALKL MGAIDNL
|
|---|
| |