Gene Ava_2144 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_2144 
Symbol 
ID3680091 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp2651264 
End bp2651941 
Gene Length678 bp 
Protein Length225 aa 
Translation table11 
GC content41% 
IMG OID637717487 
ProductNAD-dependent epimerase/dehydratase 
Protein accessionYP_322659 
Protein GI75908363 
COG category[G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0451] Nucleoside-diphosphate-sugar epimerases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones46 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAAACT CATCCCATAT TTTTTTAGTT GGTGCTAGTC GCGGCGTTGG GAGAGAAATT 
GCCAACTACT TAACTAGCCA AAATCTCAAA GTTACAGCAC TTTTGAGAAG TGAAGCATCT
CGTCCTGAAC TAGAGGCAAT AGGTGTTCAA GTTGTTTTGG GCGATGCTTT AAATGCCAGC
GATGTAGAAC GGGCAACTTT AACCGATGAG CCTATTCATA CTGTTATTAG CACCCTCGGT
GGTCTACCCA CAGACGCAGC AAAACCAGAT TACCCCGGAA ACAAGAATCT CATTGATGCA
GCACTCAAAG CCGGAGCGCA AAAATTTATC CTTGTGACTT CTATTGGTAC AGGAAATAGT
GTAGAAGCTC TTTCTCCCCA AGTGCTGGCA GTATTGGGGC CAGTTTTAGT AGAGAAAGAT
AAAGCCGAAC AACATTTAAT TGCTAGTGGA CTAACTTATA CAATCATCCG TCCTGGAGGA
CTAAAATCAG AGCCATCCAC AGGAAACGGC ATATTAACTG AAGATACTAG AATTATAGGT
AGCATCCATC GCGCTGATGT GGCACGTTTA GTTATAGAGT GTTTAAATTC TGAGCGTGCT
AATAATAAAA TATTGTCAGC CGTAGACAAG AATATGTTAT TTACCAAAAC AGATTTTATA
GAGTTTAGTT TGGATTAA
 
Protein sequence
MTNSSHIFLV GASRGVGREI ANYLTSQNLK VTALLRSEAS RPELEAIGVQ VVLGDALNAS 
DVERATLTDE PIHTVISTLG GLPTDAAKPD YPGNKNLIDA ALKAGAQKFI LVTSIGTGNS
VEALSPQVLA VLGPVLVEKD KAEQHLIASG LTYTIIRPGG LKSEPSTGNG ILTEDTRIIG
SIHRADVARL VIECLNSERA NNKILSAVDK NMLFTKTDFI EFSLD