Gene Ava_2134 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_2134 
Symbol 
ID3680275 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp2636010 
End bp2639081 
Gene Length3072 bp 
Protein Length1023 aa 
Translation table11 
GC content45% 
IMG OID637717477 
Productphosphoenolpyruvate carboxylase 
Protein accessionYP_322649 
Protein GI75908353 
COG category[C] Energy production and conversion 
COG ID[COG2352] Phosphoenolpyruvate carboxylase 
TIGRFAM ID[TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGTTCTG TTTTATACTC CTTATCTGAA TCTGCTAATT TATATCCAGC ATCGGAATTA 
TTCTTGCGTC ATCGTCTCCA AATAGTAGAA GAACTGTGGG AGTCGGTACT GCGGCAAGAA
TGCGGCCAAA ATATGGTGGA TTTGTTACGA CAGTTGCGTG ATTTGTGTTC GCCAGAAGGA
CAAGCCACAA AAGACCAAGC AGTTTCTGCT GTCAAGTTAA TTGAACAGTT GAATATTAAT
GAAGCTATCC GGGCGGCTAG GGCTTTTGCT TTGTATTTTC AGCTGATCAA CATCATAGAG
CAGGAATATG AGCAAAGGCA GCAATTAACC CGCTATTCTG ACTTAGAAGC GGAAACAGCA
CCCCTGAATG GTTCCGAAAA CATTACCTCA TCCTCTAACC ACAACGAAGA TGATGTCATT
TTCAACCGGG GCTTAGGAAC TGATTTCTTA GGAAAAAATT GGACTAATCG CGGACAAGGG
AAACAAAAAG GTACTTTTGC GGCGTTATTT CCCTTACTGT CTAAATTAAA TGTCCCCCCC
CAACAAATTC AACGCCTAAT TTCCCAACTA GATGTCCGTT TGGTATTCAC CGCCCACCCG
ACGGAAATTG TCCGCCACAC CATTCGGGAC AAACAACGGC AAGTAGTAGA TTTGTTGCAA
CAACTCGATG AGGTGGAAAA TCGGGCTAAG GAGGGCGGCG GCTATCCTTG GGAAGCGGGG
GAAATTCGGG AAAAATTACT AGAAGAAATT CGCTTGTGGT GGCGTACAGA TGAACTCCAC
CAATTTAAGC CCACTGTATT GGATGAAGTG GATTATGCTT TGCACTACTT CCAAGAAGTT
TTATTTGATG GGATTCCCCA ACTGTATAAG CGCTTCAAAT ACGCCCTCAA TCAAACCTTT
TCTTGGCTAG AACCACCCAG TAAAGATTTT TGTTCCTTCG GTTCTTGGGT AGGTTCAGAT
AGAGACGGTA ATCCATCGGT AACACCGGAA ATTACCTGGC AGACAGCTTG TTATCAGCGC
AAAATGGTGC TGGAAAGATA TATCAAGTCA GTCAAGCAAT TGATTGAATT ATTAAGTATC
TCCATGCACT GGAGTGACGT TTTACCAGAC TTATTGGAAT CCTTGGAGTT AGATCAATCC
CAGTTAAGTG AAGTATACGA CGCATTAGCC CTGAGATATC GCCAAGAACC TTATCGCCTG
AAGTTAGCTT ACGTCCTCAA GCGGCTGGAA AATACCCGCG ATCGCAATTT AGCATTATAT
AAAGGTGAAA CCCCCACCAA TGAAGATAGC CCCATGTATC GTTCGGGGGC AGAATTTCTG
GCAGAACTAC GGTTAATTCA GCATAACTTG ACAGAAACAG GTTTAAGCTG CCGAGAATTG
GATAATTTGA TCTGTCAAGT GGAAATTTTT GATTTTAACT TGACAAAATT AGACATTCGT
CAAGAATCCA CCAGACACTC CGACGCGTTA AACGAGATTC TCGACTATCT CCAACTATTA
CCCCAGCCAT ACAACGACCT CTCCGAAGAA CAGCGAGTGG CTTGGCTGAC AACCGAACTG
CAAACCCGTC GCCCATTAAT TTCGTCAGAA TTACCATTCT CAGATAAAAC TAATGATGTC
ATCAAAACCT TCCGCGTAGT GCGATCGCTC CAGCAAGAAT TTGGCATTAA TATCTGCCAA
ACTTACATCA TTAGTATGTG TCGTCAAGTC AGCGATGTCT TAGAAGTTTT ACTCCTAGCC
AAAGAAGCCA GACTTTTTGA CCCAGCGATC GCCGTCGGCA CAATTCAGGT TGTACCATTA
TTTGAGACTG TCGAAGATTT ACAACGTTCT CGCAGCGTCA TGCGACAGTT ATTTGAATTA
CCTCTATACC GCGCCCTATT AGCAGGTGGT TATAAAAGTA CTGAGGTAAA AGTCCCCAGT
CCTGAGTCAA CCCCACTCCC CACCCCCCAC TCCGTATTAA CCCCCGACTT ACAAGAAGTC
ATGCTGGGCT ATTCCGACAG CAACAAAGAC TCTGGCTTCT TGAGTAGCAA CTGGGAAATT
CACAAAGCCC AAAAATCATT ACAGAAAATC GCCGAAGAAT ATGGCGTAAA TCTGCGGATT
TTCCACGGGC GCGGCGGTTC CGTAGGACGG GGAGGCGGCC CAGCCCACGA AGCGATTTTG
GCACAGCCAG GACACAGCAT CAACGGGCGG ATTAAAATTA CCGAACAAGG GGAAGTATTA
GCTTCCAAAT ACTCCTTGCT AGATTTAGCC CTGTACAACT TGGAAACCAT CACCACGGCG
GTAATTCAAG CCAGCCTCCT GCGGACTGGG TTTGATGATA TTGAACCGTG GAACGAAATT
ATGGAAGAAT TAGCAGCGCG ATCGCGGCAA CATTATCGTG GTTTAATTTA CGAACAACCT
GATTTCATCG ACTTCTTCCA CCAAGTCACC CCCATCGAAG AAATCAGTCA ACTACAAATT
AGTTCTCGTC CCGCCCGTCG TCCTTCTGGT AAGAAAGATT TAAGCAGCCT CCGCGCCATC
CCTTGGGTAT TTAGCTGGAC ACAAACACGA TTCTTACTAC CTTCTTGGTA CGGTGTCGGT
ACAGCTTTGC AAGAATTTTT CAACGAAGAA CCAGAAGAAC ATCTCAAATT GATGCGCTAC
TTTTATGTCA AGTGGCCTTT CTTCAAGATG GTGATTTCTA AAGTAGAAAT GACCTTGGCA
AAAGTAGATA TGCAAATGGC TGGTCACTAC GTACAAGAAT TATCTGACCC TGAAGATAAG
TCTCGATTCG AGAAAGTATT TGAGCAAATC GCTAACGAAT ATTATCTCAC CAGAGATTTA
GTCTTAAAAA TCACCGACCA CAGTCGGCTT TTAGATGGTG ATCCTGTACT CCAGCGTTCT
GTACAGTTAC GCAATGGTAC AATCGTCCCG CTAGGATTTA TCCAAGTTTC CCTCCTCAAG
CGCCTACGCC AGTCCAAGAA TAATAATGCT ACCTCTGGTG TCATTCACTC TCGTTACAGC
AAGGGAGAAT TATTGCGCGG CGCACTGTTA ACCATTAATG GTATTGCCGC AGGGATGAGA
AATACAGGTT GA
 
Protein sequence
MGSVLYSLSE SANLYPASEL FLRHRLQIVE ELWESVLRQE CGQNMVDLLR QLRDLCSPEG 
QATKDQAVSA VKLIEQLNIN EAIRAARAFA LYFQLINIIE QEYEQRQQLT RYSDLEAETA
PLNGSENITS SSNHNEDDVI FNRGLGTDFL GKNWTNRGQG KQKGTFAALF PLLSKLNVPP
QQIQRLISQL DVRLVFTAHP TEIVRHTIRD KQRQVVDLLQ QLDEVENRAK EGGGYPWEAG
EIREKLLEEI RLWWRTDELH QFKPTVLDEV DYALHYFQEV LFDGIPQLYK RFKYALNQTF
SWLEPPSKDF CSFGSWVGSD RDGNPSVTPE ITWQTACYQR KMVLERYIKS VKQLIELLSI
SMHWSDVLPD LLESLELDQS QLSEVYDALA LRYRQEPYRL KLAYVLKRLE NTRDRNLALY
KGETPTNEDS PMYRSGAEFL AELRLIQHNL TETGLSCREL DNLICQVEIF DFNLTKLDIR
QESTRHSDAL NEILDYLQLL PQPYNDLSEE QRVAWLTTEL QTRRPLISSE LPFSDKTNDV
IKTFRVVRSL QQEFGINICQ TYIISMCRQV SDVLEVLLLA KEARLFDPAI AVGTIQVVPL
FETVEDLQRS RSVMRQLFEL PLYRALLAGG YKSTEVKVPS PESTPLPTPH SVLTPDLQEV
MLGYSDSNKD SGFLSSNWEI HKAQKSLQKI AEEYGVNLRI FHGRGGSVGR GGGPAHEAIL
AQPGHSINGR IKITEQGEVL ASKYSLLDLA LYNLETITTA VIQASLLRTG FDDIEPWNEI
MEELAARSRQ HYRGLIYEQP DFIDFFHQVT PIEEISQLQI SSRPARRPSG KKDLSSLRAI
PWVFSWTQTR FLLPSWYGVG TALQEFFNEE PEEHLKLMRY FYVKWPFFKM VISKVEMTLA
KVDMQMAGHY VQELSDPEDK SRFEKVFEQI ANEYYLTRDL VLKITDHSRL LDGDPVLQRS
VQLRNGTIVP LGFIQVSLLK RLRQSKNNNA TSGVIHSRYS KGELLRGALL TINGIAAGMR
NTG