Gene Ava_2117 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_2117 
Symbol 
ID3680375 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp2618603 
End bp2619499 
Gene Length897 bp 
Protein Length298 aa 
Translation table11 
GC content45% 
IMG OID637717462 
ProductBeta-lactamase-like 
Protein accessionYP_322634 
Protein GI75908338 
COG category[R] General function prediction only 
COG ID[COG1235] Metal-dependent hydrolases of the beta-lactamase superfamily I 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCAAGGA TAGAGAACCA ATTTACTGTG CAATTTTGGG GAGTTCGTGG CAGCATCCCC 
TGTCCTGGTC CACATACAGT CCGCTATGGT GGTAATACAC CTTGTGTTGA AATGCAGGTG
GCAGGCAAAC GTCTAATTTT TGATGGTGGT ACAGGGTTAC ACGTTTTGGG GCAATCTTTA
TTGCGCCAAA TGCCTATAGA AGCTTACCTA TTTTTCACTC ATTCCCATTG GGATCATATG
CAGGGTTTCC CCTTCTTTGT TCCTGGGTTT GTGAAAGGAA ATAATTTTCA TATCTATGGT
GCGATCGCTC CCGATGGTTC CACAGTGGAA CAACGATTGA ACGATCAAAT GCTCCACCCT
AATTTTCCCG TACCTTTGCA GATCATGCAA GCCAACCTGC ATTTTCACGA CGTGCAACCA
GGGCTACCAA TCCATATCAA TGATATTACC GTCGAAACAG CAGCCCTCAA CCATCCAGGT
GAAGCCGTAG GCTATCGAAT TAACTGGCGT GGTGGTGCAG CCGTTTACAT TACAGATACA
GAACATTTTC CAGATAAATT GGATGAAAAT GTCCTGAAGT TGGCTAAAAA TGCAGATATT
CTCATTTATG ATTCCACCTA TACTGATGAA GAATATCACT CTGCCAAATC GCCGAGAATT
GGTTGGGGAC ATTCGACTTG GCAAGAAGCT GTCAAAATAG CAAAGGCGGC TAATGTCAAA
ACATTAGTTA TATTCCACCA TGATCCTGCC CATGATGATG ATTTCTTAGA TCAGATTGGC
GCGCAAGCTT TTGCCCAGTT TTCTGGGGCA ATTATGGCGC GGGAAGGCAT GGTACTACAG
GTTCCTGTGT CGGCTCCCTT ATCGGAATCT TTTCCCGTTA GTAATGTTTC CGCATAA
 
Protein sequence
MSRIENQFTV QFWGVRGSIP CPGPHTVRYG GNTPCVEMQV AGKRLIFDGG TGLHVLGQSL 
LRQMPIEAYL FFTHSHWDHM QGFPFFVPGF VKGNNFHIYG AIAPDGSTVE QRLNDQMLHP
NFPVPLQIMQ ANLHFHDVQP GLPIHINDIT VETAALNHPG EAVGYRINWR GGAAVYITDT
EHFPDKLDEN VLKLAKNADI LIYDSTYTDE EYHSAKSPRI GWGHSTWQEA VKIAKAANVK
TLVIFHHDPA HDDDFLDQIG AQAFAQFSGA IMAREGMVLQ VPVSAPLSES FPVSNVSA