Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ava_2099 |
Symbol | |
ID | 3680495 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anabaena variabilis ATCC 29413 |
Kingdom | Bacteria |
Replicon accession | NC_007413 |
Strand | - |
Start bp | 2592963 |
End bp | 2593721 |
Gene Length | 759 bp |
Protein Length | 252 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 637717444 |
Product | sugar transferase |
Protein accession | YP_322616 |
Protein GI | 75908320 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG2148] Sugar transferases involved in lipopolysaccharide synthesis |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 0.672919 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.000893553 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGACTGCCC AGAGTTCACT CCTCTCCGGC AAACGACGCT TACGGCAAGA TGCTAGCTCG TCTATGCGTT CTACAGTCAA GCGTGGTCAA AAAACAAAGA CACCTAAAAT CAAACCCAAA GGTTTGTCTT TGCAAGGTAT CAACGGAGAG TTTGCGAAAA GACTTTTCGA TATTGTGTTT TCTTTATTGG TGTTGATCCT CTTCTCACCA GTCTATTTAA TTCTGGCCTC GCTGATTGCT TTAAGCTCAG AAGGCCCAAT TTTTTATGTC CAAGAAAGAA TCGGCCAAAA CTACAAACCC TTTAATTGTA TTAAATTCCG GACAATGGTC AGCAACGCTG ACGAAGTCCT CATGCAAATG ATGGAAACAT CGCCACAGTT GCGACAGGAA TTTGAAAGTA GTTTTAAGCT CAAAAAAGAC CCCAGAATTA CTAAAATTGG TCAATTTTTA CGAATTACCA GCCTGGATGA GTTTCCCCAA TTCTGGAATG TTTTAAAAGG GGATATGAGT GTTGTTGGCC CGCGCCCTTT AGTAGCAGAA GAATTACCAA AATATGGTGA TCACATCGAA CAAGTTCTAA CAATTCGACC AGGAATTACT GGATTATGGC AAGTTTCAGG AAGGAATGAC ATTCCCTATC CCCGACGAGT ACAAATCGAC TTGCATTATG TCAAGTCTAG GACTCTCTGG TTGGACTTAT GGATTATATT GAAAACAATT GATGTGGTAA TCATGCCCAA AAATAACGGA GCATACTGA
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Protein sequence | MTAQSSLLSG KRRLRQDASS SMRSTVKRGQ KTKTPKIKPK GLSLQGINGE FAKRLFDIVF SLLVLILFSP VYLILASLIA LSSEGPIFYV QERIGQNYKP FNCIKFRTMV SNADEVLMQM METSPQLRQE FESSFKLKKD PRITKIGQFL RITSLDEFPQ FWNVLKGDMS VVGPRPLVAE ELPKYGDHIE QVLTIRPGIT GLWQVSGRND IPYPRRVQID LHYVKSRTLW LDLWIILKTI DVVIMPKNNG AY
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