Gene Ava_2099 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_2099 
Symbol 
ID3680495 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp2592963 
End bp2593721 
Gene Length759 bp 
Protein Length252 aa 
Translation table11 
GC content41% 
IMG OID637717444 
Productsugar transferase 
Protein accessionYP_322616 
Protein GI75908320 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2148] Sugar transferases involved in lipopolysaccharide synthesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.672919 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000893553 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGACTGCCC AGAGTTCACT CCTCTCCGGC AAACGACGCT TACGGCAAGA TGCTAGCTCG 
TCTATGCGTT CTACAGTCAA GCGTGGTCAA AAAACAAAGA CACCTAAAAT CAAACCCAAA
GGTTTGTCTT TGCAAGGTAT CAACGGAGAG TTTGCGAAAA GACTTTTCGA TATTGTGTTT
TCTTTATTGG TGTTGATCCT CTTCTCACCA GTCTATTTAA TTCTGGCCTC GCTGATTGCT
TTAAGCTCAG AAGGCCCAAT TTTTTATGTC CAAGAAAGAA TCGGCCAAAA CTACAAACCC
TTTAATTGTA TTAAATTCCG GACAATGGTC AGCAACGCTG ACGAAGTCCT CATGCAAATG
ATGGAAACAT CGCCACAGTT GCGACAGGAA TTTGAAAGTA GTTTTAAGCT CAAAAAAGAC
CCCAGAATTA CTAAAATTGG TCAATTTTTA CGAATTACCA GCCTGGATGA GTTTCCCCAA
TTCTGGAATG TTTTAAAAGG GGATATGAGT GTTGTTGGCC CGCGCCCTTT AGTAGCAGAA
GAATTACCAA AATATGGTGA TCACATCGAA CAAGTTCTAA CAATTCGACC AGGAATTACT
GGATTATGGC AAGTTTCAGG AAGGAATGAC ATTCCCTATC CCCGACGAGT ACAAATCGAC
TTGCATTATG TCAAGTCTAG GACTCTCTGG TTGGACTTAT GGATTATATT GAAAACAATT
GATGTGGTAA TCATGCCCAA AAATAACGGA GCATACTGA
 
Protein sequence
MTAQSSLLSG KRRLRQDASS SMRSTVKRGQ KTKTPKIKPK GLSLQGINGE FAKRLFDIVF 
SLLVLILFSP VYLILASLIA LSSEGPIFYV QERIGQNYKP FNCIKFRTMV SNADEVLMQM
METSPQLRQE FESSFKLKKD PRITKIGQFL RITSLDEFPQ FWNVLKGDMS VVGPRPLVAE
ELPKYGDHIE QVLTIRPGIT GLWQVSGRND IPYPRRVQID LHYVKSRTLW LDLWIILKTI
DVVIMPKNNG AY