| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ava_2071 |
|---|
| Symbol | |
|---|
| ID | 3680544 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Anabaena variabilis ATCC 29413 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007413 |
|---|
| Strand | - |
|---|
| Start bp | 2563305 |
|---|
| End bp | 2563865 |
|---|
| Gene Length | 561 bp |
|---|
| Protein Length | 186 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 637717416 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_322588 |
|---|
| Protein GI | 75908292 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 0.895954 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 8 |
|---|
| Fosmid unclonability p-value | 0.0210116 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGATCCAAA CTGACACACC CAACATCCAA TCTCTATCGA CAGAAGTATC GCAGCTGCGT
CAAGAACTAC AGCTTCGAGA TCAACTAGTA CAACAGCTAT CTCAAGAACT ATTTAGGCTA
GTCAAGGGCA ATACTAATTT TATGCCCCAA CGCTTAGAGT CTGAGTATGA TTTAAGCCAG
TTACAAGCGT TAAGAGAGCA ATTACAAGCT GTTGAACAAC AAGTAACATT TTATCAAGAG
CAGATTACAT CTCGTGACAC GGAAATTTAC CAACTGCGTC AGTCTGTACA AGAACTCACA
GACCGTAGTC GGATGTTGGA GCAAGTAGTG CAGGAACTAC CGCAAATTTA CCGTCGTAAG
TTTGAAGAAC GTATGGCTCC CGTCAGAGAA AAAGTCGCAG TTCTACAAAG AGAAAACCGT
CAGTTGCAAG CAGAACTCCA AAGTGTGAGT TATCGTCTAG CACTCAAAAC CCGTACCTCT
AGCCACAGTG GTATTGATTT ACCTAACTTC CCACGTCCAA CATCGGGACA AGCTAATATT
CCTAGCGTAC AGAACGCGTG A
|
|---|
| Protein sequence | MIQTDTPNIQ SLSTEVSQLR QELQLRDQLV QQLSQELFRL VKGNTNFMPQ RLESEYDLSQ
LQALREQLQA VEQQVTFYQE QITSRDTEIY QLRQSVQELT DRSRMLEQVV QELPQIYRRK
FEERMAPVRE KVAVLQRENR QLQAELQSVS YRLALKTRTS SHSGIDLPNF PRPTSGQANI
PSVQNA
|
|---|
| |