Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ava_2060 |
Symbol | tsf |
ID | 3680709 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anabaena variabilis ATCC 29413 |
Kingdom | Bacteria |
Replicon accession | NC_007413 |
Strand | - |
Start bp | 2550193 |
End bp | 2551134 |
Gene Length | 942 bp |
Protein Length | 313 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 637717405 |
Product | elongation factor Ts |
Protein accession | YP_322577 |
Protein GI | 75908281 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0264] Translation elongation factor Ts |
TIGRFAM ID | [TIGR00116] translation elongation factor Ts |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.515297 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCGGAAA TATCTGCAAA ACTCGTCCAA GAGCTACGCC AAAAGACTGG TGCTGGCATG ATGGACTGCA AAAAAGCGCT GAAAGAAACT GAAGGCGATG TCGAACAAGC CATAGATTGG CTACGTAAAA AAGGTATCGC TTCTGCGGGT AAAAAAAGCG ATCGCATTGC GGCAGAAGGT CTAGTAGACA CCTACATTCA ACCCGGTGGT AAGGTGGGTG TACTGATAGA AGTTAACTGC CAGACAGATT TTGTCGCCCG TAACGATGCT TTTAAAACTC TAGTTAAAAA CTTAGCTCAA CAAGCAGCAA CAGCCGATAG TGTTGAGTCT TTGCTAGCTC AACCCTACAT TGAAGATGCT AACCTCACTG TAGATGAAGC CATCAAGCAA ACTATTGCTA ACTTGGGTGA AAATATCCAG GTACGGCGCT TCATCAACTT TGCACTCACA GATAAGACAG GAGTTGTAGA CAGCTACATT CACACCGGCG GTAGAGTTGG TGTGTTAGTT GAATTAAACT CTCAATCTGA GGCTGGTGCT GCTAACGAAG AAGTGCAGAA TTTAGCAAGA AACGCAGCTA TGCAGGTTGC AGCTTGTCCC AACGTTGAGT ATGTCAGCGT CGAGCAAATC CCTGCTGAAG TTGTCCAGAG AGAAAAAGAC GTTGAATCTG GTAAAGAAGA CATAGCAAAT AAACCAGAAA ACATTAGAGA AAAAATTGTT CAAGGACGGA TTGAAAAACG CCTGAAAGAA CTAACTCTAG TTGATCAGCC TTATATTCGC GATCAAAGTA TTTCTGTAGA AGACTTGGTG AAACAAGTTA AGGCTAAAGC GGGTGAAGAA GTTGAAATCA TCCGTTTTGT CCGCTACATA CTGGGTGAAG GCATCGAAAA GCAAGAAAGC AACTTTGCTG AAGAAGTCGC CGCCCAAATG GGTGTGAAGT AA
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Protein sequence | MAEISAKLVQ ELRQKTGAGM MDCKKALKET EGDVEQAIDW LRKKGIASAG KKSDRIAAEG LVDTYIQPGG KVGVLIEVNC QTDFVARNDA FKTLVKNLAQ QAATADSVES LLAQPYIEDA NLTVDEAIKQ TIANLGENIQ VRRFINFALT DKTGVVDSYI HTGGRVGVLV ELNSQSEAGA ANEEVQNLAR NAAMQVAACP NVEYVSVEQI PAEVVQREKD VESGKEDIAN KPENIREKIV QGRIEKRLKE LTLVDQPYIR DQSISVEDLV KQVKAKAGEE VEIIRFVRYI LGEGIEKQES NFAEEVAAQM GVK
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