Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ava_2047 |
Symbol | |
ID | 3680696 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anabaena variabilis ATCC 29413 |
Kingdom | Bacteria |
Replicon accession | NC_007413 |
Strand | + |
Start bp | 2533158 |
End bp | 2535455 |
Gene Length | 2298 bp |
Protein Length | 765 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 637717392 |
Product | retinal pigment epithelial membrane protein |
Protein accession | YP_322564 |
Protein GI | 75908268 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG3670] Lignostilbene-alpha,beta-dioxygenase and related enzymes |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.211058 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTTTTTA AAGTAAATGG ACGAATTTAC GAAGAAGAAA GCGGAGTAGG TATTGCTAAT TTAGTTGTCG AAGCCTTTGA TAAAGATATC CTCAAAAATG ATAAACTTGG TCAAACAAAA ACTGATCAAG ATGGCAAGTT TGCGATTAAT TATTCAGAAG CAAATTTCAA AAGCGCATTA GAAAAGTTTG AAGGTAATCC CGATTTATAT ATCGTTGTTA AAACTCCAGA CCTTGCCAAT ATTTTGTATA GTAGTGAGAA GAATATCCGC CCTGATGCTA GTACAAACGA GCATTTCGAC GTACCTATTC CGAAAACAAC TTTAATAGCT TATCAAGAAC GATCAACTCA AGAAAATAAA CAACTATTAA AAATTCTGCT GGGGATGGCT TGGCTAGATG GGGAACTCGA ACCTGGAGAA AAAGAATATT TATCCAAAGT CGCAGCCCAA AAAAGATTAA CTGAAGATGC AGAGATTAAA AGTTTATTAT CTGATAGTAA GCCAATACAG CCCCAGCAGT GTTTTGATTG GTTACAAGCT TATTTAGGCA AAAATCCTAG CCCTTACAAA TTTGAGGCTT TAGATGAAGT TTTAGAAAGC TTATTCACCA GTGGCGCAGA AATAGACGAA CGAGAAAAAG AAATGTTAGC GGCTTTTGCT GACAAAAATA CTCGTCAAAC GGTTCTCCAG GAAAGACTAG GCAGCATTTT CCTCGATCCA GATTTCTTAG CTAAAGTCAC TCCTGACACC CCAGATTCCC CTCAAACTGC CCGTAAAAAC CTCAAAAAAG GCTTTGCTTA TGCTCGTGTT CCCCAAGCAG TTTTAAGTAA ACTCACATCT GCACAGTCTG ATCCGCAAGT CAAGGAAGAA TTAGCCCATC GCTTTTTAAC TCTCAACTAT GCTCCAGTCC GCAAAGAAAT TACGGCTGAT AACCTAGAAG TGATCGGCAA ACTACCACAA GAGTTGTCAG GGACGTTTCT CCGGATTGGG CCGAACCCCC GCTTCGCTCC TTTGGGTCTT TATCATTGGT TTGATGGAGA CGGTATGATT CACGGGGTAC AAATTAAAAA TGGTAAGGCC AGCTATCGTA ATCGTTACGT TCGTACTGAA GGATGGAAGA TTGAAGAAAA AGAAGGTCAA GCTATCTGGC CAGGATTGCT GAATCTACCC CGCTTCGATG AACCCCACGG CATTATGATG AAAAATGTAG CCAATACCGC TTTAGTTTGG CATCACGGAC GGTTACTCGC TCTTTGGGAA GGAGGCGAAC CTTATGAAAT TAGCCTTCCC AATTTAGACA CTGTCGGTTC TTATACCTTT AATGAGCAGT TAACCTTCCC CTTTTGCGCC CACCCCAAAG TCGATGCTAG AACCGGGGAA ATGATGTTCT TTGGTTATCA ACCCCTAACC AAGCCCTACG TTCAATATGG TATCGTCTCA CCAGAAGGAA AAATTGTCAA AACCATACCA ATTGACATTC CTTCTCCAAT TAGTATGCAC GACTTTGCTA TTACGGAAAA ATATACTATT TTCCTCGATA TGCCTCTAGC CCTCAAACCG ATGCGAGTTA TGCAGGGCAA AGTTCCCCTC GTGTTTGAAC GTAATAAACC GAGTCGTTTT GGTATTATTC CTCGGCATGG GGGAGAAATA CGCTGGTTTA CCGTGCCGAG CTGTATGGTC TACCATGTAG TCAACGCCTA TGAAGAAGGT AACGAGGTAA TTTTAGTTGC CTATCGCATG GATTGGACAC AACTATTTAT CCCTGACAGA GAAAACGCCC TCGATTTTGT CAACACCGAC ACCTCGTCAG AAAAACTTGC CCCAGAAATG ACGAAATTGT ATCGTTGGCG GTTTAATCTT TCTACTGGTC AAGTCAAGGA GGAAATACTT GACAAAGACG AAATTTGTGA GTTCCCCCGC ATCAACGATC GCTTAATTGG ATGCAAGATG CGTTATGTGT ACTCCGGAAT CGGGGCTATG TATATGGAAC GCCCGCTATT TGATGGAGTC AAGAAGTATG ACTTAGAATC CGGAACAGCG CAATCTGTTT ATTTTGGTCG TGGACGCTTT GGTGGTGAAT GTGTCTTTGC ACCTCGTCCT GGTGGCAAAA CTGAAGATGA TGGATGGGTA TTGACTTATA TTTATGATGC CGTTAACAAG CGATCGGAAT TTATTGTGTT AGATGCCCAG AATATCACTG CTGAACCTGT CGCCCGTGTT ATTCTTCCTC AAAGAGTTCC CTTTGGCTTC CATTGTGAGT GGGTTTCTAG CGAGAAAATG GCAACCGCGA ACAGATAG
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Protein sequence | MLFKVNGRIY EEESGVGIAN LVVEAFDKDI LKNDKLGQTK TDQDGKFAIN YSEANFKSAL EKFEGNPDLY IVVKTPDLAN ILYSSEKNIR PDASTNEHFD VPIPKTTLIA YQERSTQENK QLLKILLGMA WLDGELEPGE KEYLSKVAAQ KRLTEDAEIK SLLSDSKPIQ PQQCFDWLQA YLGKNPSPYK FEALDEVLES LFTSGAEIDE REKEMLAAFA DKNTRQTVLQ ERLGSIFLDP DFLAKVTPDT PDSPQTARKN LKKGFAYARV PQAVLSKLTS AQSDPQVKEE LAHRFLTLNY APVRKEITAD NLEVIGKLPQ ELSGTFLRIG PNPRFAPLGL YHWFDGDGMI HGVQIKNGKA SYRNRYVRTE GWKIEEKEGQ AIWPGLLNLP RFDEPHGIMM KNVANTALVW HHGRLLALWE GGEPYEISLP NLDTVGSYTF NEQLTFPFCA HPKVDARTGE MMFFGYQPLT KPYVQYGIVS PEGKIVKTIP IDIPSPISMH DFAITEKYTI FLDMPLALKP MRVMQGKVPL VFERNKPSRF GIIPRHGGEI RWFTVPSCMV YHVVNAYEEG NEVILVAYRM DWTQLFIPDR ENALDFVNTD TSSEKLAPEM TKLYRWRFNL STGQVKEEIL DKDEICEFPR INDRLIGCKM RYVYSGIGAM YMERPLFDGV KKYDLESGTA QSVYFGRGRF GGECVFAPRP GGKTEDDGWV LTYIYDAVNK RSEFIVLDAQ NITAEPVARV ILPQRVPFGF HCEWVSSEKM ATANR
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