Gene Ava_2035 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_2035 
SymbolilvH 
ID3680976 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp2518015 
End bp2518563 
Gene Length549 bp 
Protein Length182 aa 
Translation table11 
GC content46% 
IMG OID637717380 
Productacetolactate synthase 3 regulatory subunit 
Protein accessionYP_322552 
Protein GI75908256 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0440] Acetolactate synthase, small (regulatory) subunit 
TIGRFAM ID[TIGR00119] acetolactate synthase, small subunit 


Plasmid Coverage information

Num covering plasmid clones41 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.403996 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTGTCTG AGCCTGTGTT GGCAAAGATG AAACATACTC TTTCAGTTCT GGTAGAAGAT 
GAGGCGGGAG TTCTGTCCCG CATTGCTAGT TTATTTGCTC GTCGTGGCTT TAATATAGAA
AGCCTGGCTG TTGGTTCGGG GGAAGAGGGC GGGGTTTCCC GCATTACTAT GGTTGTGCCT
GGTGACGATC GCGTGATTGA ACAACTTACC AAACAACTAT ACAAGCTCGT TAACGTTCTC
AAAGTACAGG ATATAACTGA AACTCCTTGT GTGGAGAGAG AATTGATGCT CCTGAAGGTG
AACGCCACTA GCAGCAACCG TTCAGAAGTC ATTGAACTAG CTCAAATTTT CCGGGCGCGA
GTAGTCGATG TAGCGGAAGA TTCTTTAACT TTGGAAGTGG TCGGCGACCC TGGTAAAATG
GTGGCGATCG TCCAGGTGCT ACAAAAGTTT GGTATCAGGG AAATCGCCCG TACTGGTAAA
ATCGCCCTGA CTCGTGAATC TGGTGTCAAT ACTGAGTTAC TTAAATCCTT AGAAGCGAAA
GTTTCTTAA
 
Protein sequence
MLSEPVLAKM KHTLSVLVED EAGVLSRIAS LFARRGFNIE SLAVGSGEEG GVSRITMVVP 
GDDRVIEQLT KQLYKLVNVL KVQDITETPC VERELMLLKV NATSSNRSEV IELAQIFRAR
VVDVAEDSLT LEVVGDPGKM VAIVQVLQKF GIREIARTGK IALTRESGVN TELLKSLEAK
VS