Gene Ava_2024 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_2024 
Symbol 
ID3681296 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp2505362 
End bp2505973 
Gene Length612 bp 
Protein Length203 aa 
Translation table11 
GC content46% 
IMG OID637717368 
ProductAlkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen 
Protein accessionYP_322541 
Protein GI75908245 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0450] Peroxiredoxin 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.130359 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.426152 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCATCA CCTACGGAAC ACAAGAAAGC CTCCGCGTTG GTCAACAGGC TCCCGATTTT 
ACAGCAACAG CTGTAGTTGA TCAGGAATTC AAGACAATTA AGCTTTCCGA CTATCGTGGT
AAGTATGTTG TCTTGTTCTT CTATCCCCTA GACTTTACCT TTGTTTGCCC CACGGAGATC
ACAGCATTTA GCGATCGCTA CGAAGAATTC AAGAAACTTA ACACCGAAAT TCTCGGTGTG
TCCGTTGATA GCGAGTTCTC CCACCTAGCT TGGATTCAAA CTGATCGTAA GTCTGGTGGT
GTTGGCGACC TAAATTATCC CTTAGTTTCC GATATTAAGA AAGAGGTTAG CGACGCTTAC
AACGTACTAG ACCCAGCAGC AGGTATTGCT TTACGTGGTC TGTTCATCAT CGATAAAGAT
GGTATCATTC AGCACGCTAC TATTAACAAC CTAGCTTTTG GTCGTAGCGT TGACGAAACC
CTACGGACAT TACAAGCAAT CCAGTATGTC CAGTCTCACC CAGATGAAGT TTGCCCTGCT
GGTTGGCAAC CTGGCGAAAA GACCATGACT CCCGACCCTG TGAAGTCCAA AGTTTACTTC
GCTGCTGTTT AA
 
Protein sequence
MSITYGTQES LRVGQQAPDF TATAVVDQEF KTIKLSDYRG KYVVLFFYPL DFTFVCPTEI 
TAFSDRYEEF KKLNTEILGV SVDSEFSHLA WIQTDRKSGG VGDLNYPLVS DIKKEVSDAY
NVLDPAAGIA LRGLFIIDKD GIIQHATINN LAFGRSVDET LRTLQAIQYV QSHPDEVCPA
GWQPGEKTMT PDPVKSKVYF AAV