Gene Ava_2006 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_2006 
Symbol 
ID3681433 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp2488306 
End bp2489547 
Gene Length1242 bp 
Protein Length413 aa 
Translation table11 
GC content45% 
IMG OID637717349 
Productcarbohydrate kinase, FGGY 
Protein accessionYP_322523 
Protein GI75908227 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1070] Sugar (pentulose and hexulose) kinases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.301028 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATTTTT ATTTGGGGAT AGACTTTGGT ACGTCCGGTG CTAGGGCTGT GGTAATTGAT 
GAATCAGCCC ATATCCAGGT GCAGGTGCGT TATCCTTGGC TAGAGGTTGA TTCCCTAGTC
TCTAGTTGGC AAAAGGCGTT GTTGACGCTG CTGGGACAAA TTCCCGAACA GTTGCGGCGA
GAAATAAAAG CGATCGCAAT TAACGGTACT TCCTCTACAG TTTTATTATG CGATGCAAAT
GGCAACCCTG TAGATACTCC TTTACTCTAC AACGATGGGC GGGGATCAAT AGTACTAAAT
GAGTTGAGAG ATATCGCACC AGCAAATCAT ACTGTTTTAA GTGCTACCTC CAGCTTGGCT
AAATTGCGCT GGATGATGCA GTTACCCTCT TTTGGCGAAG CACGATATTT TCTGCACCAA
GCCGACTGGT TAGGGTTTCT CCTACATGGA AAGTTGGGAA TCAGCGACTA CCACAATGCT
TTAAAGCTGG GTTATGACGT GGAAAAGTTG CAATACCCCG AATGGTTAGA AAGTCTGCAA
CTACCGATTC ATTTACCCAA AGTTTTACCC CCTGGGACTC CCATTGGTGA AGTAAGTCCC
GAAATTTCCC AACAGTTTTT ATTACCTCCA GACTGCTTGG TATGTGCGGG GACAACAGAT
AGTATTGCAG CATTTCTGGC GAGTGGGGCA AAATCCCCAG GGGAAGCGGT GACTTCCCTT
GGTTCGACAT TAGTACTCAA ACTTTTGAGT CACACCCCTG TAGAAGATGT ACGATATGGA
ATTTATAGCC ATCGCCTTGG TGATTTGTGG CTAACCGGTG GCGCATCAAA TACGGGGGGT
GCAGTATTAC GGGAATTTTT CACTGATGCT GAGTTAGAAA ACTTGAGTCG TGAAATTGAT
GCCACAAAAG CCAGCGAATT AGATTATTAT CCCTTGTTGA AAGTAGGGGA ACGCTTTCCT
ATCAATGATC CCAATTTACC CCCACGCCTC ACACCACGCC CAGAGAATCC AGCAGAATTT
TTACATGGCT TATTAGAAAG TATCGCCCGT ATAGAAACCC AAGGATATGA ACTATTACAA
AAATTGGGTG CAGATAGCTT AAATCAAGTT TATACAGCCG GTGGCGGCGC AAAAAACCCC
ACATGGAATG CAATTCGGCA AAGAAACTTA AAAGTTCCCG TCATTTCTTC ACTTAATACA
GAAGCCGCCT ATGGTTCAGC ATTGCTGGCG ATGGGAAGAT AA
 
Protein sequence
MDFYLGIDFG TSGARAVVID ESAHIQVQVR YPWLEVDSLV SSWQKALLTL LGQIPEQLRR 
EIKAIAINGT SSTVLLCDAN GNPVDTPLLY NDGRGSIVLN ELRDIAPANH TVLSATSSLA
KLRWMMQLPS FGEARYFLHQ ADWLGFLLHG KLGISDYHNA LKLGYDVEKL QYPEWLESLQ
LPIHLPKVLP PGTPIGEVSP EISQQFLLPP DCLVCAGTTD SIAAFLASGA KSPGEAVTSL
GSTLVLKLLS HTPVEDVRYG IYSHRLGDLW LTGGASNTGG AVLREFFTDA ELENLSREID
ATKASELDYY PLLKVGERFP INDPNLPPRL TPRPENPAEF LHGLLESIAR IETQGYELLQ
KLGADSLNQV YTAGGGAKNP TWNAIRQRNL KVPVISSLNT EAAYGSALLA MGR