Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ava_1963 |
Symbol | |
ID | 3681623 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anabaena variabilis ATCC 29413 |
Kingdom | Bacteria |
Replicon accession | NC_007413 |
Strand | + |
Start bp | 2440029 |
End bp | 2440991 |
Gene Length | 963 bp |
Protein Length | 320 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 637717304 |
Product | DNA polymerase III subunit delta' |
Protein accession | YP_322480 |
Protein GI | 75908184 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0470] ATPase involved in DNA replication |
TIGRFAM ID | [TIGR00678] DNA polymerase III, delta' subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.00141399 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCAATA ACCCGTTTGC ACCACTGGTA GGACAAAAGC AAGCTATTGA GTTATTAACT CAAGCTGTTA AGCAAAACCG AGTAGCCCCG GCTTATCTAT TTGCGGGGCC AGATGGTGTA GGACGGAGTT TAGCGGCGCG TTGCTTTGTA GAGTTGTTAT TTGCATCTGT TGTGGAAGCG CGACTTCTTC CATCTTTACA ACAGCGTTTA CGTCAAGGTA ATCACCCTGA TTTACTGTGG GTACAGCCAA CTTATCAATA CCAAGGGCAA AGATTCACCG CCGCCCAAGC AGCAGAAAAG AAACTCAAAC GCAAAGCACC GCCTTTAATT CGCCTAGAAC AAATTCGAGA AATTACAGAA TTTCTCAGCC GTCCTCCCTT AGAAGCACCA AGAAATGTGG TGGTGTTGGA GGAAGCGCAA ACAATGGCGG AACCAGCCGC AAATGCTTTG TTGAAGACGT TAGAAGAACC AGGACAAGCA ACCATAGTTT TGATTACGCC TTCCCCTGAG TCTGTATTGC CGACTTTGGT GTCACGCTGT CAACGCATTC CCTTTTACAG TTTAGATACA ACATCTTTGA CTCAAGTACT TACGCAAACC GGGAATCAAG CAGTTTTACA GCACCCAGCC CTGTTGAGTT TAGCATCTGG TAGCCCAGGG AGTGCGATCG CCTCTTATGA ACAATTACAA ACTATTCCCC CTGACTTACT GCAAGATTTA ACAACAGCAC CAAAATCTCA ACGTCACGCG TTGGAATTAG CTAAGAGAAT CGACAAGGAT TTAGAAACGG AAGCACAACT ATGGTTAGTG GATTATTTAC AGCAATCCTA CTGGCAAAAG CGGCATCTAC CAGGGATTAT CAGTCAACTA GAAAAAGCTC GTAAATACCT ACTGGTCTAC GCTCAACCGC GCCTCGTTTG GGAATGTACT TTATTATCTG TATATCAGGA ATTTAATATC TAA
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Protein sequence | MTNNPFAPLV GQKQAIELLT QAVKQNRVAP AYLFAGPDGV GRSLAARCFV ELLFASVVEA RLLPSLQQRL RQGNHPDLLW VQPTYQYQGQ RFTAAQAAEK KLKRKAPPLI RLEQIREITE FLSRPPLEAP RNVVVLEEAQ TMAEPAANAL LKTLEEPGQA TIVLITPSPE SVLPTLVSRC QRIPFYSLDT TSLTQVLTQT GNQAVLQHPA LLSLASGSPG SAIASYEQLQ TIPPDLLQDL TTAPKSQRHA LELAKRIDKD LETEAQLWLV DYLQQSYWQK RHLPGIISQL EKARKYLLVY AQPRLVWECT LLSVYQEFNI
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