Gene Ava_1957 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_1957 
Symbol 
ID3681617 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp2433225 
End bp2434223 
Gene Length999 bp 
Protein Length332 aa 
Translation table11 
GC content44% 
IMG OID637717298 
ProductUDP-galactose 4-epimerase 
Protein accessionYP_322474 
Protein GI75908178 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1087] UDP-glucose 4-epimerase 
TIGRFAM ID[TIGR01179] UDP-glucose-4-epimerase 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.880811 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.626313 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGCCTG GAAAGCCCAG CATCTTGGTA ACGGGGGGAG CAGGATATAT TGGTTCGCAC 
ACTGTCCTGG CTCTCAAGCA AGCAGGTTAC GACGTGGTAA TACTAGATAA TTTGGTCTAT
GGACATCGTG ATTTAGTAGA AAAAGTTTTA CAAGTAGAAT TGGTGGTGGG TGATACAGGC
GATCGCTCTT TGTTAGATGA GTTATTTAAA TCCCGTCATT TTGATGCAGT GATGCACTTT
TCCGCTTACG CTTATGTAGG CGAATCTGTT AGTGATCCTG CCAAGTACTA TCGCAATAAT
GTTTTAGGCA CATTAACCTT ATTAGAAGCG ATGCTGGCTG CTTCAATTAA TAAGTTTGTC
TTTTCTTCCA CTTGTGCCAC TTATGGAGTG CCAAAAAGTG TTCCCATTCC CGAAGATCAT
CCCCAAGACC CCATCAATCC TTATGGTGCG ACTAAGTTAA TGGTGGAAAG GATTTTGGCG
GATTTCGATG TAGCTTATGG TTTGAAATCA GTCCGTTTCC GTTACTTTAA TGCTGCTGGT
GCTAATCCTG ATGGATTGCT AGGTGAGGAT CACAACCCCG AAACTCATTT AATCCCTCTA
GTACTACTAA CAGCTTTAGG TAAACGTAAA TCCATCTCTA TTTTCGGCAC TGATTATCCC
ACACCCGATG GCACTTGTAT TCGGGATTAT ATCCACGTTA ACGACTTAGC CGATGCCCAC
GTTTTGGGAT TGGAATATTT GTTAAAAGGT GGAGATAGCG AAGTTTTTAA CTTGGGTAAT
GGCCAAGGTT TCTCTGTCAG AGAAGTAATT GCAGCTGGTG AACAAGTCAC AGGATTACCC
ATAGCCGTTG AAGAATGCGA TCGCCGTCCC GGAGATCCCC CCAGTCTGAT TGGTAGTGGT
GAGAAAGCCA GAAAAATCCT TGGCTGGCAA CCAAATTACC CATCAATCAA AGATATTGTT
GCCCATGCTT GGCAATGGCA TCAGAAGCGG CATCAATAA
 
Protein sequence
MSPGKPSILV TGGAGYIGSH TVLALKQAGY DVVILDNLVY GHRDLVEKVL QVELVVGDTG 
DRSLLDELFK SRHFDAVMHF SAYAYVGESV SDPAKYYRNN VLGTLTLLEA MLAASINKFV
FSSTCATYGV PKSVPIPEDH PQDPINPYGA TKLMVERILA DFDVAYGLKS VRFRYFNAAG
ANPDGLLGED HNPETHLIPL VLLTALGKRK SISIFGTDYP TPDGTCIRDY IHVNDLADAH
VLGLEYLLKG GDSEVFNLGN GQGFSVREVI AAGEQVTGLP IAVEECDRRP GDPPSLIGSG
EKARKILGWQ PNYPSIKDIV AHAWQWHQKR HQ